RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 AMFRQ9UKV5 643 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 PTPRBP23467 1997 aa24■■□□□ 1.43
CPNE1-223ENST00000475146 C1orf232A0A0U1RR37 186 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 LMO7DNF2Z398 122 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 APOC4-APOC2K7ER74 178 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 PDE2AO00408 941 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 APOC2P02655 101 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 CELA2BP08218 269 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 HOXC4P09017 264 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 MYCLP1P12525 358 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 DUSP3P51452 185 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 STC1P52823 247 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 CLDN6P56747 220 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 ELOCQ15369 112 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 KCTD16Q68DU8 428 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 RFLNAQ6ZTI6 216 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 TECPR1Q7Z6L1 1165 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 MARCH9Q86YJ5 346 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 OR1E3Q8WZA6 343 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 AP2M1Q96CW1 435 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 TEKT5Q96M29 485 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 MLPHQ9BV36 600 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 OSBPL8Q9BZF1 889 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 CLPBQ9H078 707 aa23.99■■□□□ 1.43
CPNE1-223ENST00000475146 KLHL8Q9P2G9 620 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-223ENST00000475146 HACD1B0YJ81 288 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 ANKRD66B4E2M5 251 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 H7C0C1 242 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 CLDN7O95471 211 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 PROS1P07225 676 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 GPR1P46091 355 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 ATP5OP48047 213 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 PTSQ03393 145 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 WASHC5Q12768 1159 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 ST3GAL2Q16842 350 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 HES3Q5TGS1 186 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 TMPRSS12Q86WS5 348 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 SPATA22Q8NHS9 363 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 ALG3Q92685 438 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 HERPUD2Q9BSE4 406 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 ABCG8Q9H221 673 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 USP29Q9HBJ7 922 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 MRPL40Q9NQ50 206 aaKnown RBP23.98■■□□□ 1.43
CPNE1-223ENST00000475146 NCKIPSDQ9NZQ3 722 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 DGKBQ9Y6T7 804 aa23.98■■□□□ 1.43
CPNE1-223ENST00000475146 LY6G6EA0A0G2JKS1 128 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 YY2O15391 372 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 LRP4O75096 1905 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 FTCDO95954 541 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 MT-CYBP00156 380 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-223ENST00000475146 PTPN7P35236 360 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 CDK3Q00526 305 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 CDKN3Q16667 212 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 C6orf132Q5T0Z8 1188 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 UBL4BQ8N7F7 174 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 HTR3CQ8WXA8 447 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 GLMNQ92990 594 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 LYSMD1Q96S90 227 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 TEX101Q9BY14 249 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 SUDS3Q9H7L9 328 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-223ENST00000475146 CYP4F12Q9HCS2 524 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 UBP1Q9NZI7 540 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 PACSIN2Q9UNF0 486 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-223ENST00000475146 EFR3BQ9Y2G0 817 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 U3KQA8 63 aa23.97■■□□□ 1.43
CPNE1-223ENST00000475146 F5H423 210 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-223ENST00000475146 TNFRSF10CO14798 259 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 PMPCBO75439 489 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 JUPP14923 745 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 NFKB1P19838 968 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 TEAD1P28347 426 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 E2F1Q01094 437 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 CDK18Q07002 472 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 DPTQ07507 201 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 XRCC4Q13426 336 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 NOMO1Q15155 1222 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 NR0B2Q15466 257 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 SLC14A2Q15849 920 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 AADACL2Q6P093 401 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 PID1Q7Z2X4 250 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 GKN2Q86XP6 184 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 ACTL9Q8TC94 416 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 CCHCR1Q8TD31 782 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 SCG3Q8WXD2 468 aaKnown RBP23.96■■□□□ 1.43
CPNE1-223ENST00000475146 SCAMP4Q969E2 229 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 TRIB3Q96RU7 358 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 VAT1Q99536 393 aa23.96■■□□□ 1.43
CPNE1-223ENST00000475146 GOLGA4Q13439 2230 aaKnown RBP23.96■■□□□ 1.43
CPNE1-223ENST00000475146 CHD8Q9HCK8 2581 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 PLXNB3Q9ULL4 1909 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 PRSS38A1L453 326 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 CPED1A4D0V7 1026 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 MIF4GDA9UHW6 222 aaKnown RBP23.95■■□□□ 1.42
CPNE1-223ENST00000475146 SLC4A1P02730 911 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 PTMAP06454 111 aaKnown RBP23.95■■□□□ 1.42
CPNE1-223ENST00000475146 PYGMP11217 842 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 CD68P34810 354 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-223ENST00000475146 RPIAP49247 311 aa23.95■■□□□ 1.42
CPNE1-223ENST00000475146 OTUD4Q01804 1114 aaKnown RBP23.95■■□□□ 1.42
CPNE1-223ENST00000475146 CCDC70Q6NSX1 233 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms