RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 INTUQ9ULD6 942 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 PADI4Q9UM07 663 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 GPR34Q9UPC5 381 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 CHKBQ9Y259 395 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 PCDHB1Q9Y5F3 818 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CACNA1BQ00975 2339 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 KCNK1O00180 336 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PSMD11O00231 422 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 APOL1O14791 398 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CSO75390 466 aaKnown RBP9.42□□□□□ -0.9
PDPN-204ENST00000475043 MTA2O94776 668 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 JCHAINP01591 159 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 HLA-DQB2P05538 268 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CD46P15529 392 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 COMTP21964 271 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 TGM2P21980 687 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CES1P23141 567 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 TRIM23P36406 574 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 SLC1A1P43005 524 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 MAGEA1P43355 309 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PPIDQ08752 370 aaKnown RBP9.42□□□□□ -0.9
PDPN-204ENST00000475043 SPA17Q15506 151 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PERM1Q5SV97 790 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 LRRC66Q68CR7 880 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 KCTD16Q68DU8 428 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 RAET1GQ6H3X3 334 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 LVRNQ6Q4G3 990 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 Q6ZVL8 140 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 TAF8Q7Z7C8 310 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 HEATR4Q86WZ0 1026 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PELI3Q8N2H9 469 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 SDR16C5Q8N3Y7 309 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PLD5Q8N7P1 536 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 ARL10Q8N8L6 244 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 TC2NQ8N9U0 490 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 KYQ8NBH2 561 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 LPCAT1Q8NF37 534 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 NAT6Q93015 286 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 DTD2Q96FN9 168 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 SMIM14Q96QK8 99 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 MCCC1Q96RQ3 725 aaPredicted RBP9.42□□□□□ -0.9
PDPN-204ENST00000475043 RBM15Q96T37 977 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDPN-204ENST00000475043 CCDC3Q9BQI4 270 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 PHPT1Q9NRX4 125 aaPredicted RBP9.42□□□□□ -0.9
PDPN-204ENST00000475043 DDX56Q9NY93 547 aaKnown RBP9.42□□□□□ -0.9
PDPN-204ENST00000475043 SEPT10Q9P0V9 454 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 CD84Q9UIB8 345 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 GPSM3Q9Y4H4 160 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 DGKBQ9Y6T7 804 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 ADAMTS20P59510 1910 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
PDPN-204ENST00000475043 GOLGA4Q13439 2230 aaKnown RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 A0A0J9YYE9 177 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 PRSS38A1L453 326 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 C3orf70A6NLC5 250 aaPredicted RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 ZNF487B1APH4 448 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 TNFRSF10CO14798 259 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 FZD6O60353 706 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 BRINP1O60477 761 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 USP12O75317 370 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 TRBC1P01850 177 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 MPOP05164 745 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 HOXC4P09017 264 aaPredicted RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 MYCLP1P12525 358 aaPredicted RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 ZFXP17010 805 aaPredicted RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 CD86P42081 329 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 GPR1P46091 355 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 CDK3Q00526 305 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 NIPAL4Q0D2K0 466 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 SPIDRQ14159 915 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 RTP5Q14D33 572 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 LLGL1Q15334 1064 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 COL28A1Q2UY09 1125 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 FAM182AQ5T1J6 154 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 LRRC38Q5VT99 294 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 CDCP2Q5VXM1 449 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 KAZNQ674X7 775 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 SLC9A4Q6AI14 798 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 ALG1LQ6GMV1 187 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 B4GALNT4Q76KP1 1039 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 VSIG1Q86XK7 387 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 FAM46DQ8NEK8 389 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 ARRDC2Q8TBH0 407 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 FATE1Q969F0 183 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 AP2M1Q96CW1 435 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 TDRD1Q9BXT4 1180 aaKnown RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 CEP41Q9BYV8 373 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 TMEM168Q9H0V1 697 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 DPEP2Q9H4A9 486 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 CARS2Q9HA77 564 aaKnown RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 PCDH9Q9HC56 1237 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 LUC7LQ9NQ29 371 aaKnown RBP9.41□□□□□ -0.9
PDPN-204ENST00000475043 TFR2Q9UP52 801 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 PPIL1Q9Y3C6 166 aa9.41□□□□□ -0.9
PDPN-204ENST00000475043 COL27A1Q8IZC6 1860 aaPredicted RBP9.4□□□□□ -0.9
PDPN-204ENST00000475043 IGF2RP11717 2491 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms