RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 BMP4P12644 408 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 BDNFP23560 247 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 ICAM3P32942 547 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 NOS2P35228 1153 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 KPNA2P52292 529 aaKnown RBP18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 ARSFP54793 590 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 CDH17Q12864 832 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 RABL3Q5HYI8 236 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 KIAA0408Q6ZU52 694 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 VASH1Q7L8A9 365 aaPredicted RBP18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 THAP5Q7Z6K1 395 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC22A16Q86VW1 577 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 TTC39CQ8N584 583 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 ATP6V0D2Q8N8Y2 350 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 TRIB2Q92519 343 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 MUL1Q969V5 352 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 CDHR5Q9HBB8 845 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 A0A087X1B8 175 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 APLP1P51693 650 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 NEK2P51955 445 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 MBTD1Q05BQ5 628 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 MAPK11Q15759 364 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 IMPG1Q17R60 797 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 SCML4Q8N228 414 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 ZCCHC7Q8N3Z6 543 aaKnown RBP18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 HDAC11Q96DB2 347 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 GSTO2Q9H4Y5 243 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 MYOZ2Q9NPC6 264 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 HPS4Q9NQG7 708 aa18.61■□□□□ 0.57
ECHDC1-214ENST00000474289 ZBTB42B2RXF5 422 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC1A2P43004 574 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 POLD2P49005 469 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 RBP5P82980 135 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 DMPKQ09013 629 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 GALNT1Q10472 559 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 ATAD3BQ5T9A4 648 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 OTUD1Q5VV17 481 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM160B1Q5W0V3 765 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 BTBD8Q5XKL5 378 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 UGT3A1Q6NUS8 523 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 PTRH1Q86Y79 214 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 DEFB106AQ8N104 65 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 DNAJB14Q8TBM8 379 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 OSCP1Q8WVF1 389 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 TMEM125Q96AQ2 219 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 CCDC126Q96EE4 140 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 BDH2Q9BUT1 245 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 TEX13BQ9BXU2 312 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 ASB7Q9H672 318 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 THG1LQ9NWX6 298 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 DPP3Q9NY33 737 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 PTGDR2Q9Y5Y4 395 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 TCF3P15923 654 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 ARNTP27540 789 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 MATKP42679 507 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 ALDH3A2P51648 485 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 NKX2-5P52952 324 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC25A52Q3SY17 297 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 CATSPER4Q7RTX7 472 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 NDRG1Q92597 394 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 HDAC2Q92769 488 aaKnown RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 KCTD14Q9BQ13 255 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 CHID1Q9BWS9 393 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 NACA2Q9H009 215 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 MAGED1Q9Y5V3 778 aaPredicted RBP18.6■□□□□ 0.57
ECHDC1-214ENST00000474289 HCRTO43612 131 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 INMTO95050 263 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ALPLP05186 524 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 UMPSP11172 480 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PAX3P23760 479 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 GP2P55259 537 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 GEN1Q17RS7 908 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PAGE2BQ5JRK9 111 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 LINC00299Q6ZSB3 139 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 MMAAQ8IVH4 418 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 MIER2Q8N344 545 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ZNF280CQ8ND82 737 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 TRAPPC12Q8WVT3 735 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 UBXN10Q96LJ8 280 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 NTN4Q9HB63 628 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 LTB4R2Q9NPC1 389 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ADAMTS5Q9UNA0 930 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PCDHGA8Q9Y5G5 932 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 PHIPQ8WWQ0 1821 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 IGKV6-21A0A0C4DH24 114 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ANKRD34BA5PLL1 514 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 C16orf96A6NNT2 1141 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 FAM72CH0Y354 149 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 CYP2C8P10632 490 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 THRBP10828 461 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ERCC2P18074 760 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ADORA2BP29275 332 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 OAZ1P54368 228 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 SLC12A2P55011 1212 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 ADAM17P78536 824 aa18.59■□□□□ 0.57
ECHDC1-214ENST00000474289 LIPEQ05469 1076 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms