RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 UBE2Q2Q8WVN8 375 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 SCG3Q8WXD2 468 aaKnown RBP14.21□□□□□ -0.14
VAMP4-203ENST00000474047 ADAMTS14Q8WXS8 1223 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 FUBP1Q96AE4 644 aaKnown RBP14.21□□□□□ -0.14
VAMP4-203ENST00000474047 AP2M1Q96CW1 435 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 FAM118BQ9BPY3 351 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 FAM153AQ9UHL3 310 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 RSPH14Q9UHP6 348 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 KLF15Q9UIH9 416 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 RBP3P10745 1247 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 HK3P52790 923 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 KIAA1024LP59773 190 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 SHC2P98077 582 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 PTSQ03393 145 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 ELOCQ15369 112 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 SLC14A2Q15849 920 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 ALG11Q2TAA5 492 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 DEFB133Q30KQ1 61 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 ITPRIPL1Q6GPH6 555 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-203ENST00000474047 FSTL5Q8N475 847 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-203ENST00000474047 OR56A4Q8NGH8 313 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 GLMNQ92990 594 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 HES6Q96HZ4 224 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 HERPUD2Q9BSE4 406 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 TCEAL2Q9H3H9 227 aaPredicted RBP14.2□□□□□ -0.14
VAMP4-203ENST00000474047 CAAP1Q9H8G2 361 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 C10orf88Q9H8K7 445 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 PKD2L2Q9NZM6 624 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 NCOR2Q9Y618 2525 aa14.2□□□□□ -0.14
VAMP4-203ENST00000474047 K7ESM1 405 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 DDX3YO15523 660 aaKnown RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 KCNN4O15554 427 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 ZNF189O75820 626 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 NDST3O95803 873 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 TOP3BO95985 862 aaKnown RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 SLC4A1P02730 911 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 PYGLP06737 847 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 HOXC4P09017 264 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 CDK4P11802 303 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 MYCLP1P12525 358 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 TRIM23P36406 574 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 DUSP3P51452 185 aaPredicted RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 STC1P52823 247 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 TCEA2Q15560 299 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 TECPR1Q7Z6L1 1165 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 HEATR4Q86WZ0 1026 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 NRSN1Q8IZ57 195 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
VAMP4-203ENST00000474047 FSD1LQ9BXM9 530 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 GPR63Q9BZJ6 419 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 ABCG8Q9H221 673 aa14.19□□□□□ -0.14
VAMP4-203ENST00000474047 COL5A1P20908 1838 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 RFPL3O75679 317 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 C1SP09871 688 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PIRTP0C851 137 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 CD68P34810 354 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 WNT3AP56704 352 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 CCZ1BP86790 482 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 CCZ1P86791 482 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PRPSAP1Q14558 356 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 ZCCHC8Q6NZY4 707 aaKnown RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 RAB44Q7Z6P3 723 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 GKN2Q86XP6 184 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 IPMKQ8NFU5 416 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 APOLD1Q96LR9 279 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TBATAQ96M53 351 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 FCRL5Q96RD9 977 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 LYSMD1Q96S90 227 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 LRRC61Q9BV99 259 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 LGR4Q9BXB1 951 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 SUDS3Q9H7L9 328 aaPredicted RBP14.18□□□□□ -0.14
VAMP4-203ENST00000474047 ZFYVE1Q9HBF4 777 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 MAGEE1Q9HCI5 957 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 CYP4F12Q9HCS2 524 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TOR4AQ9NXH8 423 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 NCKIPSDQ9NZQ3 722 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 SHOC2Q9UQ13 582 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PCDHGA1Q9Y5H4 931 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TMEM202A6NGA9 273 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TPP1O14773 563 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 TNFRSF10CO14798 259 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 GCATO75600 419 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 ANXA9O76027 345 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 GEMP55040 296 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 CDK3Q00526 305 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 DPTQ07507 201 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 MPP3Q13368 585 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PROX2Q3B8N5 592 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 DHRS13Q6UX07 377 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 RFLNAQ6ZTI6 216 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 ZNF765Q7L2R6 523 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 LYSMD3Q7Z3D4 306 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 PELI3Q8N2H9 469 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 GALNT15Q8N3T1 639 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 SLC25A41Q8N5S1 370 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 SCAMP4Q969E2 229 aa14.18□□□□□ -0.14
VAMP4-203ENST00000474047 LRRC45Q96CN5 670 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms