RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FRYLO94915 3013 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 ADAMTS9Q9P2N4 1935 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 LOC285095A0A1B0GVY8 99 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 RGSL1A5PLK6 1076 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 KCNK5O95279 499 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 CSF2P04141 144 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 FGF1P05230 155 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 PIRTP0C851 137 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 ALPPL2P10696 532 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 JUNDP17535 347 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 GNG11P61952 73 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 DPTQ07507 201 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 BNIP3Q12983 259 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 ZNF765Q7L2R6 523 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 TECPR1Q7Z6L1 1165 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 PIP4P1Q86T03 277 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 GATAD2AQ86YP4 633 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 CBARPQ8N350 705 aaPredicted RBP13.73□□□□□ -0.21
USF1-205ENST00000473969 PLA2G15Q8NCC3 412 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 MRGPRX2Q96LB1 330 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 WDR92Q96MX6 357 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 SMIM14Q96QK8 99 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 FICDQ9BVA6 458 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 FAM83DQ9H4H8 585 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 SPASTQ9UBP0 616 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 KLQ9UEF7 1012 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 MOSPD1Q9UJG1 213 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 PYCARDQ9ULZ3 195 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 ZNF711Q9Y462 761 aa13.73□□□□□ -0.21
USF1-205ENST00000473969 A0A0U1RQS6 177 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 E7EVH7 732 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SDC3O75056 442 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 PIAS2O75928 621 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 RASGRP1O95267 797 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 AGTP01019 485 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 TNFP01375 233 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 HOXC4P09017 264 aaPredicted RBP13.72□□□□□ -0.21
USF1-205ENST00000473969 C1SP09871 688 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 CTSEP14091 401 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 GM2AP17900 193 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 TRIM23P36406 574 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SPINT3P49223 89 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 LMAN1P49257 510 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 KIAA1024LP59773 190 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SHBQ15464 509 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SIRPB2Q5JXA9 342 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 DBX2Q6ZNG2 339 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 ERMP1Q7Z2K6 904 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 LYSMD3Q7Z3D4 306 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 RD3Q7Z3Z2 195 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 NLRP8Q86W28 1048 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 OR56A4Q8NGH8 313 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 SAP25Q8TEE9 199 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 CAMK1GQ96NX5 476 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 RIOK2Q9BVS4 552 aaKnown RBP13.72□□□□□ -0.21
USF1-205ENST00000473969 CDH19Q9H159 772 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 ABCG8Q9H221 673 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 GPR27Q9NS67 375 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 FTSJ1Q9UET6 329 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 APOBEC3BQ9UH17 382 aaKnown RBP13.72□□□□□ -0.21
USF1-205ENST00000473969 PCOLCE2Q9UKZ9 415 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 DOLKQ9UPQ8 538 aa13.72□□□□□ -0.21
USF1-205ENST00000473969 GOLGA6L10A0A0M3HER8 536 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 USP27XA6NNY8 438 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 PGRMC1O00264 195 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 LDOC1O95751 146 aaPredicted RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 ATP1A1P05023 1023 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 NME1P15531 152 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 DGKAP23743 735 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 TEAD1P28347 426 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 FDFT1P37268 417 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 GDF10P55107 478 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 SRP54P61011 504 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 SIM1P81133 766 aaPredicted RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 EIF2B5Q13144 721 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 OASLQ15646 514 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 TRIP6Q15654 476 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 ZDHHC20Q5W0Z9 365 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 KDM7AQ6ZMT4 941 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 GLT6D1Q7Z4J2 308 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 HEATR4Q86WZ0 1026 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 HID1Q8IV36 788 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 EID2Q8N6I1 236 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 SCAMP4Q969E2 229 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 TSACCQ96A04 125 aaPredicted RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 FUBP1Q96AE4 644 aaKnown RBP13.71□□□□□ -0.21
USF1-205ENST00000473969 OSBPL9Q96SU4 736 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 TBL1YQ9BQ87 522 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 SPATA16Q9BXB7 569 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 LRRC40Q9H9A6 602 aa13.71□□□□□ -0.21
USF1-205ENST00000473969 EVA1BQ9NVM1 165 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms