RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SIGLEC16A6NMB1 481 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 FURINP09958 794 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 RNF224P0DH78 156 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 KELP23276 732 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SERPINA4P29622 427 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 CSNK1DP48730 415 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SCNN1BP51168 640 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 ZNF143P52747 638 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-209ENST00000473421 MLLT10P55197 1068 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 POLR2FP61218 127 aaKnown RBP12.59□□□□□ -0.39
TRAF4-209ENST00000473421 CDK3Q00526 305 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 BCL2L1Q07817 233 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SLC10A7Q0GE19 358 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 CDC20Q12834 499 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 ILF3Q12906 894 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SQSTM1Q13501 440 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 NCAPHQ15003 741 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SNAP47Q5SQN1 464 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 DOK6Q6PKX4 331 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 Q6ZVL8 140 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 MON1BQ7L1V2 547 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 TSPAN33Q86UF1 283 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 NRSN1Q8IZ57 195 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 C9orf43Q8TAL5 461 aaPredicted RBP12.59□□□□□ -0.39
TRAF4-209ENST00000473421 MIB2Q96AX9 1013 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 NUS1Q96E22 293 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 MCEEQ96PE7 176 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 SELENOOQ9BVL4 669 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 CATSPERBQ9H7T0 1116 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 PDP2Q9P2J9 529 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 TUBD1Q9UJT1 453 aa12.59□□□□□ -0.39
TRAF4-209ENST00000473421 NPIPB15A6NHN6 443 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 ZNF891A8MT65 544 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 HEXIM1O94992 359 aaKnown RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 PEX11BO96011 259 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 NTRK1P04629 796 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 SOX5P35711 763 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 GPR3P46089 330 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 UQCRFS1P47985 274 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 NDST2P52849 883 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 GSCP56915 257 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 TPI1P60174 286 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 GRM3Q14832 879 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 TPD52L1Q16890 204 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 CLEC16AQ2KHT3 1053 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 CYP4V2Q6ZWL3 525 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 TMEM135Q86UB9 458 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 ZNF677Q86XU0 584 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 PHF13Q86YI8 300 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 FAM26EQ8N5C1 309 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 MLKLQ8NB16 471 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 DTD2Q96FN9 168 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 AGAP2Q99490 1192 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 GSDMCQ9BYG8 508 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 GPN2Q9H9Y4 310 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 TRNAU1APQ9NX07 287 aaKnown RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 KCNK4Q9NYG8 393 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 AKAP7Q9P0M2 348 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-209ENST00000473421 CD84Q9UIB8 345 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 ANAPC2Q9UJX6 822 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 TP53TG5Q9Y2B4 290 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 SLC17A4Q9Y2C5 497 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 PRKAB1Q9Y478 270 aa12.58□□□□□ -0.4
TRAF4-209ENST00000473421 SPTBN1Q01082 2364 aaKnown RBP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 PRR19A6NJB7 356 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 B4E171 279 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 DFFAO00273 331 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 PDGFAP04085 211 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TSPAN7P41732 249 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 ACTR1BP42025 376 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 ACTR1AP61163 376 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 MC2RQ01718 297 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TRAF2Q12933 501 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TRA2AQ13595 282 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 IHHQ14623 411 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 DCAF12Q5T6F0 453 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TMEM71Q6P5X7 295 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 MARK2Q7KZI7 788 aaKnown RBP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 ARHGAP22Q7Z5H3 698 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 SCAMP4Q969E2 229 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 CINPQ9BW66 212 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TRIM7Q9C029 511 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 PHPT1Q9NRX4 125 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-209ENST00000473421 TAS2R14Q9NYV8 317 aa12.57□□□□□ -0.4
TRAF4-209ENST00000473421 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 GOLGA6BA6NDN3 693 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 FGF10O15520 208 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-209ENST00000473421 MAP3K6O95382 1288 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 IVLP07476 585 aa12.56□□□□□ -0.4
TRAF4-209ENST00000473421 KRT7P08729 469 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms