RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ARHGAP12Q8IWW6 846 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 RBM12BQ8IXT5 1001 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 AGBL3Q8NEM8 1001 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 FAM76AQ8TAV0 307 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 GOLGA5Q8TBA6 731 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SLC26A7Q8TE54 656 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 DDI1Q8WTU0 396 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SLC9A6Q92581 669 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 HOXB13Q92826 284 aaPredicted RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 FAM149B1Q96BN6 582 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CCDC51Q96ER9 411 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 EEF2KMTQ96G04 330 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 C5orf30Q96GV9 206 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 ART5Q96L15 291 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 LINC00615Q96LM1 132 aaPredicted RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 CAMK1GQ96NX5 476 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CD180Q99467 661 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 ZNF341Q9BYN7 854 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CPEB1Q9BZB8 566 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 TMEM117Q9H0C3 514 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 NSUN3Q9H649 340 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 RMND5AQ9H871 391 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 SLC6A20Q9NP91 592 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 AGPAT3Q9NRZ7 376 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 LIN7CQ9NUP9 197 aaKnown RBP6.04□□□□□ -1.44
RTF1-203ENST00000473214 AGPAT5Q9NUQ2 364 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 DNAJC11Q9NVH1 559 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MPP6Q9NZW5 540 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 ANGPTL2Q9UKU9 493 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 MKLN1Q9UL63 735 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CDYLQ9Y232 598 aa6.04□□□□□ -1.44
RTF1-203ENST00000473214 CNTNAP4Q9C0A0 1308 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 TRAV6A0A075B6T7 132 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 LOC102723971A0A1B0GUV8 181 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 MAGEB16A2A368 324 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GSAPA4D1B5 854 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ANXA2P2A6NMY6 339 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CDRT15L2A8MXV6 281 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 KDM4EB2RXH2 506 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 HSBP1L1C9JCN9 74 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PLK4O00444 970 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 KRIT1O00522 736 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 NRP2O60462 931 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CCNT2O60583 730 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 OPHN1O60890 802 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ZNF821O75541 412 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 CD1AP06126 327 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GRPP07492 148 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CD19P15391 556 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CALB2P22676 271 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ECHS1P30084 290 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 SLC5A2P31639 672 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 BMP8BP34820 402 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 RFC2P35250 354 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HNF1BP35680 557 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 NRG3P56975 720 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HUNKP57058 714 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 RTP1P59025 263 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 IRX1P78414 480 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 SPIBQ01892 262 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 TNFRSF17Q02223 184 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GCNT1Q02742 428 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PTH1RQ03431 593 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 TNK2Q07912 1038 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HSPA14Q0VDF9 509 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ABRQ12979 859 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GRAPQ13588 217 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ATP1A4Q13733 1029 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 COTL1Q14019 142 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ARHGAP19Q14CB8 494 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 RBBP5Q15291 538 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 SGCBQ16585 318 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 FAM187BQ17R55 369 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 FUT11Q495W5 492 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 MFSD14BQ5SR56 506 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PRAMEF20Q5VT98 475 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 RAET1GQ6H3X3 334 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HMBOX1Q6NT76 420 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 SERPINA13PQ6UXR4 307 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 C1orf186Q6ZWK4 172 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 MED25Q71SY5 747 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 SPATA21Q7Z572 469 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CAMKMTQ7Z624 323 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 PALM2Q8IXS6 379 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CFAP206Q8IYR0 622 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 TCAIMQ8N3R3 496 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 ZGPATQ8N5A5 531 aaKnown RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 OR7G3Q8NG95 312 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 GRAPLQ8TC17 118 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 ACTRT2Q8TDY3 377 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 BCL2L2Q92843 193 aaPredicted RBP6.03□□□□□ -1.44
RTF1-203ENST00000473214 TMEM186Q96B77 213 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 TMIGD2Q96BF3 282 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 HES6Q96HZ4 224 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 VCPIP1Q96JH7 1222 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 DIRC2Q96SL1 478 aa6.03□□□□□ -1.44
RTF1-203ENST00000473214 CCT7Q99832 543 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms