RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CILP2Q8IUL8 1156 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 RTL3Q8N8U3 475 aaKnown RBP21.11■□□□□ 0.97
COL18A1-207ENST00000473212 NSUN5Q96P11 429 aaKnown RBP21.11■□□□□ 0.97
COL18A1-207ENST00000473212 AP5M1Q9H0R1 490 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 CCM2LQ9NUG4 571 aaPredicted RBP21.11■□□□□ 0.97
COL18A1-207ENST00000473212 TBC1D13Q9NVG8 400 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 CYP2C18P33260 490 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 STT3AP46977 705 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 ATP4BP51164 291 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 MAP2K5Q13163 448 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 SLC14A2Q15849 920 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 UGT3A2Q3SY77 523 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 MORN1Q5T089 497 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 ISCA2Q86U28 154 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 CLVS1Q8IUQ0 354 aaPredicted RBP21.11■□□□□ 0.97
COL18A1-207ENST00000473212 EPHX4Q8IUS5 362 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 UPF1Q92900 1129 aaKnown RBP eCLIP21.11■□□□□ 0.976e-10■□□□□ 10.7
COL18A1-207ENST00000473212 GPATCH1Q9BRR8 931 aaKnown RBP21.11■□□□□ 0.97
COL18A1-207ENST00000473212 EBF1Q9UH73 591 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 MAGEB3O15480 346 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 B4GALT3O60512 393 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 SEC24DO94855 1032 aaPredicted RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 CD52P31358 61 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 SERPINH1P50454 418 aaKnown RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 SH3BP2P78314 561 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 CAPRIN1Q14444 709 aaKnown RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 OVOS1Q6IE37 1185 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 TTC33Q6PID6 262 aaPredicted RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 LZTR1Q8N653 840 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 PSMG2Q969U7 264 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 HSPBAP1Q96EW2 488 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 TRMOQ9BU70 441 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 SMOC2Q9H3U7 446 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 HACD3Q9P035 362 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 DHRS12A0PJE2 317 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 TNFRSF10BO14763 440 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 FGF10O15520 208 aaPredicted RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 TBX18O95935 607 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 HOXC8P31273 242 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 AFMIDQ63HM1 303 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 TIGD7Q6NT04 549 aaPredicted RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 GPR141Q7Z602 305 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 PARK7Q99497 189 aaKnown RBP21.1■□□□□ 0.97
COL18A1-207ENST00000473212 DNAJC15Q9Y5T4 150 aa21.1■□□□□ 0.97
COL18A1-207ENST00000473212 COL4A4P53420 1690 aaPredicted RBP21.09■□□□□ 0.97
COL18A1-207ENST00000473212 PTPRDP23468 1912 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 NLRC5Q86WI3 1866 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 CAPN3P20807 821 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 GEN1Q17RS7 908 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 IRAK1BP1Q5VVH5 260 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 KLHL35Q6PF15 583 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 CAMK1DQ8IU85 385 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 PGBD5Q8N414 524 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 ZUFSPQ96AP4 578 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 L3HYPDHQ96EM0 354 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 TBATAQ96M53 351 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 BIRC8Q96P09 236 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 PPP1R2P1Q96PQ5 205 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 ABCC13Q9NSE7 274 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 POLR3BQ9NW08 1133 aaPredicted RBP21.09■□□□□ 0.97
COL18A1-207ENST00000473212 SLC45A1Q9Y2W3 748 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 S1PR4O95977 384 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 GRB7Q14451 532 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 SEMA3AQ14563 771 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 DDR2Q16832 855 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 SLC15A3Q8IY34 581 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 CLYBLQ8N0X4 340 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 LZICQ8WZA0 190 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 IMP4Q96G21 291 aaKnown RBP21.09■□□□□ 0.97
COL18A1-207ENST00000473212 ADI1Q9BV57 179 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 TRPV2Q9Y5S1 764 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 ACTL7AQ9Y615 435 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 ARL5AQ9Y689 179 aa21.09■□□□□ 0.97
COL18A1-207ENST00000473212 A0A087WXM4 84 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 M0QZ92 97 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 TIAL1Q01085 375 aaKnown RBP eCLIP21.08■□□□□ 0.97
COL18A1-207ENST00000473212 CTBSQ01459 385 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 SIRPB2Q5JXA9 342 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 BRMS1LQ5PSV4 323 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 ZNF549Q6P9A3 640 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 MFSD2AQ8NA29 543 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 ISOC1Q96CN7 298 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 SLC25A51Q9H1U9 297 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 ABI2Q9NYB9 513 aaPredicted RBP21.08■□□□□ 0.97
COL18A1-207ENST00000473212 ABCD2Q9UBJ2 740 aa21.08■□□□□ 0.97
COL18A1-207ENST00000473212 UXTQ9UBK9 157 aaPredicted RBP21.08■□□□□ 0.97
COL18A1-207ENST00000473212 RNF103-CHMP3A0A140T963 221 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 BBIP1A8MTZ0 92 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 PIP5K1BO14986 540 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 OXTRP30559 389 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 ATP6V0D1P61421 351 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 ESRRGP62508 458 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 HERVK_113P63132 956 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 MERTKQ12866 999 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 KCTD21Q4G0X4 260 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 INTS11Q5TA45 600 aaKnown RBP21.08■□□□□ 0.96
COL18A1-207ENST00000473212 METTL23Q86XA0 190 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 TRPC4APQ8TEL6 797 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 RSPH1Q8WYR4 309 aa21.08■□□□□ 0.96
COL18A1-207ENST00000473212 MYEOVQ96EZ4 313 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms