RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CFAP58Q5T655 872 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 NCBP2-AS2Q69YL0 99 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SPECC1LQ69YQ0 1117 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 ESRP1Q6NXG1 681 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 ALKBH5Q6P6C2 394 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 SLC30A9Q6PML9 568 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 TMCO3Q6UWJ1 677 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 NPNTQ6UXI9 565 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 MICALCLQ6ZW33 695 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 MARK2Q7KZI7 788 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 GPR155Q7Z3F1 870 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 HEATR4Q86WZ0 1026 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 PSTKQ8IV42 348 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 FSTL5Q8N475 847 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 TEX26Q8N6G2 289 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 EXD3Q8N9H8 876 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 RCBTB1Q8NDN9 531 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 ZNF248Q8NDW4 579 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 GPBAR1Q8TDU6 330 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 KCNE4Q8WWG9 221 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 JPH3Q8WXH2 748 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 TTC9Q92623 222 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 NUS1Q96E22 293 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 DTD2Q96FN9 168 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 GFM1Q96RP9 751 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 CHP1Q99653 195 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 SEMA3CQ99985 751 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 MGME1Q9BQP7 344 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 NUDT22Q9BRQ3 303 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 TEX101Q9BY14 249 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 KRTAP3-3Q9BYR6 98 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CEP41Q9BYV8 373 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 FRMD8Q9BZ67 464 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 XPO4Q9C0E2 1151 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 CARS2Q9HA77 564 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 FOXJ2Q9P0K8 574 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 LRIT1Q9P2V4 623 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CNOT6Q9ULM6 557 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 SUFUQ9UMX1 484 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 DOLKQ9UPQ8 538 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 CHKBQ9Y259 395 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 HYOU1Q9Y4L1 999 aa8.07□□□□□ -1.12
USP48-207ENST00000471752 OAS3Q9Y6K5 1087 aaKnown RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 UBR5O95071 2799 aaPredicted RBP8.07□□□□□ -1.12
USP48-207ENST00000471752 SPENQ96T58 3664 aaKnown RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 ARHGEF17Q96PE2 2063 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 ANKRD36A6QL64 1941 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 PRAMEF33A0A0G2JMD5 474 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 PRSS38A1L453 326 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CFAP69A5D8W1 941 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 GOLGA6CA6NDK9 693 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 GOLGA6BA6NDN3 693 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 C3orf70A6NLC5 250 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 CYSRT1A8MQ03 144 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CACNB4O00305 520 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 ECEL1O95672 775 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 JCHAINP01591 159 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ATP1A1P05023 1023 aaKnown RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 SERPING1P05155 500 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 HLA-DQB2P05538 268 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 HOXC4P09017 264 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 PIRTP0C851 137 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 GOLGA6DP0CG33 693 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 MYBL1P10243 752 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 HTR1BP28222 390 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CD1CP29017 333 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 RBMS1P29558 406 aaKnown RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 CA5AP35218 305 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ADCY8P40145 1251 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ARL4AP40617 200 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ERVPABLB-1P60509 514 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZBED6P86452 979 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZFP36L1Q07352 338 aaKnown RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 ITKQ08881 620 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZBTB17Q13105 803 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZNF235Q14590 738 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 RFTN1Q14699 578 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 MARC1Q5VT66 337 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 LRRC66Q68CR7 880 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 LVRNQ6Q4G3 990 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 RAB11FIP2Q7L804 512 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 KDELC2Q7Z4H8 507 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 VASH2Q86V25 355 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ZSCAN30Q86W11 494 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 C17orf82Q86X59 251 aaPredicted RBP8.06□□□□□ -1.12
USP48-207ENST00000471752 GKN2Q86XP6 184 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CCNJLQ8IV13 435 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 NAGSQ8N159 534 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 FBXO39Q8N4B4 442 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 ARL14Q8N4G2 192 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 LZTR1Q8N653 840 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 CNTD1Q8N815 330 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 NIPA2Q8N8Q9 360 aa8.06□□□□□ -1.12
USP48-207ENST00000471752 WDR36Q8NI36 951 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms