RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NDUFAF2Q8N183 169 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 FRMD8Q9BZ67 464 aaPredicted RBP17.47■□□□□ 0.39
COL7A1-208ENST00000470076 THAP2Q9H0W7 228 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 SPATS2LQ9NUQ6 558 aaKnown RBP17.47■□□□□ 0.39
COL7A1-208ENST00000470076 PISDQ9UG56 409 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 ANAPC7Q9UJX3 599 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 PPIL1Q9Y3C6 166 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 LOXL2Q9Y4K0 774 aa17.47■□□□□ 0.39
COL7A1-208ENST00000470076 FLNBO75369 2602 aaKnown RBP17.47■□□□□ 0.39
COL7A1-208ENST00000470076 SETXQ7Z333 2677 aaKnown RBP17.46■□□□□ 0.39
COL7A1-208ENST00000470076 ZW10O43264 779 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 SERPING1P05155 500 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 HGFP14210 728 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 TPM4P67936 248 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 CDK3Q00526 305 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 DPTQ07507 201 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 PEX6Q13608 980 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 KRT81Q14533 505 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 RAET1GQ6H3X3 334 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 Q6ZVL8 140 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 C17orf82Q86X59 251 aaPredicted RBP17.46■□□□□ 0.39
COL7A1-208ENST00000470076 NRROSQ86YC3 692 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 TEX26Q8N6G2 289 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 IQCDQ96DY2 449 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 CMKLR1Q99788 373 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 NUP85Q9BW27 656 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 NT5MQ9NPB1 228 aa17.46■□□□□ 0.39
COL7A1-208ENST00000470076 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 MYO1FO00160 1098 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 CPNE6O95741 557 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 FUCA1P04066 466 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 CYP1A2P05177 515 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 FGF1P05230 155 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 PLA2G2AP14555 144 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 IL4RP24394 825 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 GNPDA1P46926 289 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 ZBED6P86452 979 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 B4GALNT1Q00973 533 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 CLPPQ16740 277 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-208ENST00000470076 HADHQ16836 314 aaKnown RBP17.45■□□□□ 0.38
COL7A1-208ENST00000470076 MAP9Q49MG5 647 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 ZNF438Q7Z4V0 828 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 TECPR1Q7Z6L1 1165 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 TSPAN33Q86UF1 283 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 PIM3Q86V86 326 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 SLITRK4Q8IW52 837 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 FAM71BQ8TC56 605 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 ZDHHC1Q8WTX9 485 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 PIH1D2Q8WWB5 315 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 BTBD6Q96KE9 485 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 SEMA3CQ99985 751 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
COL7A1-208ENST00000470076 SUDS3Q9H7L9 328 aaPredicted RBP17.45■□□□□ 0.38
COL7A1-208ENST00000470076 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 TAAR2Q9P1P5 351 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 SUFUQ9UMX1 484 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 SLC17A4Q9Y2C5 497 aa17.45■□□□□ 0.38
COL7A1-208ENST00000470076 A0A087X0T9 212 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 RHPN2P1A8MT19 583 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 FZD6O60353 706 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 IVLP07476 585 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 FAM228BP0C875 321 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 LIPCP11150 499 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 CTPS1P17812 591 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 CES1P23141 567 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 PBX1P40424 430 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 GPR1P46091 355 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 MAZP56270 477 aaKnown RBP17.44■□□□□ 0.38
COL7A1-208ENST00000470076 FANCCQ00597 558 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 LY6DQ14210 128 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 NR1D2Q14995 579 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 PHF19Q5T6S3 580 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 KIAA1614Q5VZ46 1190 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 HAUS2Q9NVX0 235 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 WDR70Q9NW82 654 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 AKAP7Q9P0M2 348 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-208ENST00000470076 CAPN11Q9UMQ6 739 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 TENM4Q6N022 2769 aa17.44■□□□□ 0.38
COL7A1-208ENST00000470076 B4GAT1O43505 415 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 ECEL1O95672 775 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 PYGLP06737 847 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 PDHA1P08559 390 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 ZNF30P17039 623 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 ITIH1P19827 911 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 AK4P27144 223 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-208ENST00000470076 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 GARSP41250 739 aaKnown RBP17.43■□□□□ 0.38
COL7A1-208ENST00000470076 SSR1P43307 286 aaKnown RBP17.43■□□□□ 0.38
COL7A1-208ENST00000470076 GPR3P46089 330 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 UBASH3AP57075 661 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 CTBSQ01459 385 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 ITKQ08881 620 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 GALNT2Q10471 571 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 MMRN1Q13201 1228 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 BIRC2Q13490 618 aa17.43■□□□□ 0.38
COL7A1-208ENST00000470076 PAFAH1B3Q15102 231 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms