RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 TTC30BQ8N4P2 665 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 HCAR2Q8TDS4 363 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 GLMNQ92990 594 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 ZNF669Q96BR6 464 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 STAMBPL1Q96FJ0 436 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 C9orf72Q96LT7 481 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 MCCC1Q96RQ3 725 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 HDAC8Q9BY41 377 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 GPR63Q9BZJ6 419 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 IL22Q9GZX6 179 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 SCML1Q9UN30 329 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 COQ6Q9Y2Z9 468 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 TCAF1Q9Y4C2 921 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 ARL5AQ9Y689 179 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 ANKRD12Q6UB98 2062 aa8.4□□□□□ -1.06
GAPVD1-213ENST00000469498 HEATR9A2RTY3 570 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FAM47DPA6NHR8 397 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SDR42E2A6NKP2 422 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 E7ESA3 106 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 K7ESF4 209 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 AP3B1O00203 1094 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 AREL1O15033 823 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 EIF3HO15372 352 aaKnown RBP eCLIP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 PLRG1O43660 514 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 PCDH8O95206 1070 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CLDN7O95471 211 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 ELFN1P0C7U0 828 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 MCM3P25205 808 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 NMBRP28336 390 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SOX11P35716 441 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 ZNF140P52738 457 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 TAS2R38P59533 333 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 TMPRSS15P98073 1019 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 ZBTB16Q05516 673 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 DMWDQ09019 674 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 MSLNQ13421 630 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 ARHGEF7Q14155 803 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 TAF1AQ15573 450 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 PCID2Q5JVF3 399 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 UBAP2Q5T6F2 1119 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CRTC1Q6UUV9 634 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CCNI2Q6ZMN8 369 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 USP30Q70CQ3 517 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 KBTBD6Q86V97 674 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 RASSF3Q86WH2 238 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FBXO36Q8NEA4 188 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 OR13C4Q8NGS5 318 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 OR14C36Q8NHC7 312 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CXorf40AQ8TE69 158 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 AENQ8WTP8 325 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 RLN3Q8WXF3 142 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 RAB7BQ96AH8 199 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SCRN2Q96FV2 425 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 DNAJC1Q96KC8 554 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SIGLEC10Q96LC7 697 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 ZNF778Q96MU6 729 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 RANBP9Q96S59 729 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 LYSMD1Q96S90 227 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FOXP3Q9BZS1 431 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CDC42EP4Q9H3Q1 356 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 MAGEE1Q9HCI5 957 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 BPIFA1Q9NP55 256 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 PRMT8Q9NR22 394 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 CHRAC1Q9NRG0 131 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 HACD3Q9P035 362 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SLC2A6Q9UGQ3 507 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 EBF1Q9UH73 591 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 RAB21Q9UL25 225 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FZD4Q9ULV1 537 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 SOX13Q9UN79 622 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 INVSQ9Y283 1065 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 PPIL1Q9Y3C6 166 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 TEX264Q9Y6I9 313 aa8.39□□□□□ -1.07
GAPVD1-213ENST00000469498 TRIOO75962 3097 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 TTC28Q96AY4 2481 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 C2orf81A6NN90 581 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 STX7O15400 261 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 SLC7A4O43246 635 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 LAMTOR5O43504 91 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 LDB2O43679 373 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 AP1G1O43747 822 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 MMP20O60882 483 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 CRTAMO95727 393 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 C6P13671 934 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 ZNF30P17039 623 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 PGAM1P18669 254 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 ADRA1DP25100 572 aa8.38□□□□□ -1.07
GAPVD1-213ENST00000469498 ACSL1P33121 698 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms