RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SKILP12757 684 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 CR2P20023 1033 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 HTR7P34969 479 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 CDK3Q00526 305 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 MYL5Q02045 173 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 TXNRD3NBQ6F5E7 133 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF571Q7Z3V5 609 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 TRIM74Q86UV6 250 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF761Q86XN6 746 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 HSPH1Q92598 858 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 CCDC74BQ96LY2 380 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 AGAP2Q99490 1192 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 TEX101Q9BY14 249 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 FRMD8Q9BZ67 464 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 PHPT1Q9NRX4 125 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 STARD5Q9NSY2 213 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 SEPT10Q9P0V9 454 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 CNOT8Q9UFF9 292 aaKnown RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 IL17BQ9UHF5 180 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 PCDHB11Q9Y5F2 797 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 HEMK1Q9Y5R4 338 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ARHGAP6O43182 974 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 MAFKO60675 156 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 EML2O95834 649 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 CPP00450 1065 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 VIPR1P32241 457 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ADCY8P40145 1251 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 HCAR3P49019 387 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 RENBPP51606 427 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 AP1S1P61966 158 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ILF3Q12906 894 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF235Q14590 738 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 IHHQ14623 411 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 RFTN1Q14699 578 aaPredicted RBP12.24□□□□□ -0.45
HDAC3-204ENST00000469207 FAM182AQ5T1J6 154 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 RAET1GQ6H3X3 334 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 SASS6Q6UVJ0 657 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 MARK2Q7KZI7 788 aaKnown RBP12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF438Q7Z4V0 828 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 TECPR1Q7Z6L1 1165 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ANKRD20A12PQ8NF67 263 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 KIAA1524Q8TCG1 905 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 LRRN4Q8WUT4 740 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 SCAMP4Q969E2 229 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 NKD1Q969G9 470 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 TMEM159Q96B96 161 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 RNF31Q96EP0 1072 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 DTD2Q96FN9 168 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 NUDCD1Q96RS6 583 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 GSDMCQ9BYG8 508 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 ZWILCHQ9H900 591 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 OCIAD1Q9NX40 245 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 PHTF1Q9UMS5 762 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 PCYT1BQ9Y5K3 369 aaPredicted RBP12.24□□□□□ -0.45
HDAC3-204ENST00000469207 B3GALT1Q9Y5Z6 326 aa12.24□□□□□ -0.45
HDAC3-204ENST00000469207 SDK2Q58EX2 2172 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-204ENST00000469207 A0A1W2PQC6 194 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 PDE2AO00408 941 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-204ENST00000469207 TERTO14746 1132 aaKnown RBP12.23□□□□□ -0.45
HDAC3-204ENST00000469207 SUV39H1O43463 412 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 PGLSO95336 258 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 SOD1P00441 154 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ITGB2P05107 769 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 DESP17661 470 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 CSF2RBP32927 897 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ACTR1BP42025 376 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 LIMK2P53671 638 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ACTR1AP61163 376 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 BIRC2Q13490 618 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 POLNQ7Z5Q5 900 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 PTRH1Q86Y79 214 aaKnown RBP12.23□□□□□ -0.45
HDAC3-204ENST00000469207 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 PIH1D2Q8WWB5 315 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ART4Q93070 314 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 TAAR9Q96RI9 348 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 FUCA2Q9BTY2 467 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 SLC12A9Q9BXP2 914 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ABCG8Q9H221 673 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 ANO10Q9NW15 660 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 TRNAU1APQ9NX07 287 aaKnown RBP12.23□□□□□ -0.45
HDAC3-204ENST00000469207 SLC17A4Q9Y2C5 497 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 PRKAB1Q9Y478 270 aa12.23□□□□□ -0.45
HDAC3-204ENST00000469207 IGHV1OR21-1A0A087WYE8 117 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 A8MU76 341 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 EIF3CLB5ME19 914 aaKnown RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 MAP3K6O95382 1288 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 CCDC172P0C7W6 258 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 RARAP10276 462 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 CYP2A6P11509 494 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-204ENST00000469207 LIFP15018 202 aa12.22□□□□□ -0.45
HDAC3-204ENST00000469207 UGT1A3P35503 534 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms