RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 CLPTM1O96005 669 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PROCP04070 461 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 UGT2B4P06133 528 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 NUDT2P50583 147 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 RPL7AP62424 266 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 C1QBPQ07021 282 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GTF2H3Q13889 308 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ACAP1Q15027 740 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SF3A2Q15428 464 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CST6Q15828 149 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF528Q3MIS6 628 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 KBTBD12Q3ZCT8 623 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 TFDP3Q5H9I0 405 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PIK3R6Q5UE93 754 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LPCAT4Q643R3 524 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 C16orf87Q6PH81 154 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LAYNQ6UX15 382 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LRRC69Q6ZNQ3 347 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 POLNQ7Z5Q5 900 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SCD5Q86SK9 330 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 FAM71AQ8IYT1 594 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 STK40Q8N2I9 435 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CPXM2Q8N436 756 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LZTR1Q8N653 840 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PRSS33Q8NF86 280 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 DTNBP1Q96EV8 351 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SRPK1Q96SB4 655 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 NDNQ99608 321 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CADM1Q9BY67 442 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 NMUR2Q9GZQ4 415 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 TNKS2Q9H2K2 1166 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SGK2Q9HBY8 427 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GPATCH2LQ9NWQ4 482 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SLC24A2Q9UI40 661 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LCTP09848 1927 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CEP250Q9BV73 2442 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CCDC163A0A0D9SF12 145 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CPED1A4D0V7 1026 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CACNB4O00305 520 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GIPC1O14908 333 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 FGF10O15520 208 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ANXA6P08133 673 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 MSX2P35548 267 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 BLKP51451 505 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 DUSP3P51452 185 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 FOXK2Q01167 660 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GNA12Q03113 381 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PEX6Q13608 980 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 UBAP2LQ14157 1087 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ACSBG2Q5FVE4 666 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 KIAA1211LQ6NV74 962 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 FBXL22Q6P050 247 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 EZH1Q92800 747 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CELF6Q96J87 481 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GRIP2Q9C0E4 1043 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 KLHL4Q9C0H6 718 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ATP13A3Q9H7F0 1226 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 XAB2Q9HCS7 855 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SCUBE2Q9NQ36 999 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SAR1AQ9NR31 198 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SEPT3Q9UH03 358 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 RNF103-CHMP3A0A140T963 221 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 F8W8V4 182 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 AVILO75366 819 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 MOSPD3O75425 235 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 LINGO3P0C6S8 592 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 ATXN8OSP0DMR3 200 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 ANPEPP15144 967 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 ADRA1BP35368 520 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 HNF1BP35680 557 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 SKIV2L2P42285 1042 aaKnown RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 AFF3P51826 1226 aaKnown RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 ELP6Q0PNE2 266 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 CYLC2Q14093 348 aaPredicted RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 GRM3Q14832 879 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 TAF5Q15542 800 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 TCEA2Q15560 299 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF284Q2VY69 593 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 TRMT5Q32P41 509 aaKnown RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 PTPN20Q4JDL3 420 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 RINLQ6ZS11 566 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 Q6ZVU0 165 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 TMEM110Q86TL2 294 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 IL17RCQ8NAC3 791 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 OR7D4Q8NG98 312 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 OR6K2Q8NGY2 324 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 EXT2Q93063 718 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 RSPRY1Q96DX4 576 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 AHCYL2Q96HN2 611 aaKnown RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 CCT7Q99832 543 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 SLC4A5Q9BY07 1137 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 SLC7A5P2Q9GIP4 190 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 OSBPL2Q9H1P3 480 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 GAREM1Q9H706 876 aa6□□□□□ -1.45
SHQ1-205ENST00000468371 C20orf96Q9NUD7 363 aaPredicted RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 STAU2Q9NUL3 570 aaKnown RBP eCLIP6□□□□□ -1.45
SHQ1-205ENST00000468371 CHCHD3Q9NX63 227 aaKnown RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 KLHL8Q9P2G9 620 aaPredicted RBP6□□□□□ -1.45
SHQ1-205ENST00000468371 FTSJ1Q9UET6 329 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms