RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF143P52747 638 aaPredicted RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 USP46P62068 366 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 DGCR6Q14129 220 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 TAF5Q15542 800 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PTPRNQ16849 979 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 CAPN13Q6MZZ7 669 aaPredicted RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 WDR59Q6PJI9 974 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 CHST9Q7L1S5 443 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 OR4L1Q8NH43 312 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 RIPOR3Q96MK2 946 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 MCMBPQ9BTE3 642 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 AARSD1Q9BTE6 412 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 TTPALQ9BTX7 342 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 EPB41L1Q9H4G0 881 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 MCCC2Q9HCC0 563 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 UBAP1Q9NZ09 502 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 HCN3Q9P1Z3 774 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 CLUHO75153 1309 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 RNASEH2AO75792 299 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 UGT2B17O75795 530 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ATP6V1G2O95670 118 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 SNRPB2P08579 225 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 RARAP10276 462 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 SMPD1P17405 629 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 EIF2B2P49770 351 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ELP6Q0PNE2 266 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 SMARCB1Q12824 385 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ATAT1Q5SQI0 421 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 BEND5Q7L4P6 421 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 TAF8Q7Z7C8 310 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 GALNT13Q8IUC8 556 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ALLCQ8N6M5 410 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PCDH20Q8N6Y1 951 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 UBR7Q8N806 425 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ATP6V1C2Q8NEY4 427 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 BPIFB6Q8NFQ5 453 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 CERS2Q96G23 380 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PANX1Q96RD7 426 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ACO2Q99798 780 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 DCUN1D5Q9BTE7 237 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PAIP1Q9H074 479 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 SEMA4AQ9H3S1 761 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 KCNMB3Q9NPA1 279 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 DUOX1Q9NRD9 1551 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ARHGAP20Q9P2F6 1191 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PTCH2Q9Y6C5 1203 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ATG13O75143 517 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TFEBP19484 476 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 NT5EP21589 574 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 SLC6A2P23975 617 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CMPK1P30085 196 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 STARP49675 285 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ZNF132P52740 706 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PKNOX1P55347 436 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CORO7P57737 925 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 OR14C36Q8NHC7 312 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 GPR152Q8TDT2 470 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 AP3S1Q92572 193 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 EXOC2Q96KP1 924 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TNKS2Q9H2K2 1166 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 HPSEQ9Y251 543 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CCDC182A6NF36 153 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TLR5O60602 858 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 LRATO95237 230 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ABCG1P45844 678 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CACNA2D1P54289 1103 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ATP13A5Q4VNC0 1218 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 FAM91A1Q658Y4 838 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 SNX20Q7Z614 316 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 TCAIMQ8N3R3 496 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 GLIS3Q8NEA6 775 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 SMG7Q92540 1137 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 COPS8Q99627 209 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CERS4Q9HA82 394 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 CHMP1AQ9HD42 196 aaPredicted RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 MCUBQ9NWR8 336 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 HECAQ9UBI9 543 aaPredicted RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 IRAK3Q9Y616 596 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PLCH1Q4KWH8 1693 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ROBO3Q96MS0 1386 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 A0A087WXM4 84 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 SNUPNO95149 360 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 IDSP22304 550 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PPIBP23284 216 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 IL12BP29460 328 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ATXN1P54253 815 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 CRADDP78560 199 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PUDPQ08623 228 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 RTL4Q6ZR62 310 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 GPR180Q86V85 440 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 RASGEF1AQ8N9B8 481 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 ANKRD52Q8NB46 1076 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 OR5T3Q8NGG3 340 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 PTCD2Q8WV60 388 aaKnown RBP8.7□□□□□ -1.02
HPS4-209ENST00000466781 BRI3BPQ8WY22 251 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 HAVCR1Q96D42 359 aa8.7□□□□□ -1.02
HPS4-209ENST00000466781 MRPL57Q9BQC6 102 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms