RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 USP1O94782 785 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 SEMA4FO95754 770 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 IGHV4-34P06331 123 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 TUBBP07437 444 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 BPIP17213 487 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 PGAM1P18669 254 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ARNTP27540 789 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 NMBRP28336 390 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 MAGEA4P43358 317 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 SPINT3P49223 89 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 FNTBP49356 437 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ARSDP51689 593 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 DCDC1P59894 354 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 PDE1BQ01064 536 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 LAMB3Q13751 1172 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ARHGEF7Q14155 803 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 CRYMQ14894 314 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ZNF284Q2VY69 593 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ANKRD20A4Q4UJ75 823 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 UBAP2Q5T6F2 1119 aaKnown RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 KIAA1161Q6NSJ0 714 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ESRP1Q6NXG1 681 aaKnown RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 NLRP9Q7RTR0 991 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 CYP2U1Q7Z449 544 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 CCDC25Q86WR0 208 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ANKMY2Q8IV38 441 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 ZBED8Q8IZ13 594 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 FBXO36Q8NEA4 188 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 OR4K2Q8NGD2 314 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 CXorf40AQ8TE69 158 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 STYXQ8WUJ0 223 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 MFSD3Q96ES6 412 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 DTD2Q96FN9 168 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 FCRL3Q96P31 734 aaPredicted RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 NAT9Q9BTE0 207 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 C1QTNF2Q9BXJ5 285 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 C6orf106Q9H6K1 298 aaPredicted RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 NLE1Q9NVX2 485 aaPredicted RBP11.13□□□□□ -0.63
VCP-204ENST00000466100 LRP4O75096 1905 aa11.13□□□□□ -0.63
VCP-204ENST00000466100 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 MAGEB16A2A368 324 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CCDC78A2IDD5 438 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 RGSL1A5PLK6 1076 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 IGLON5A6NGN9 336 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 LRRC72A6NJI9 287 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 C2orf81A6NN90 581 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 NEMP1O14524 444 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 RECQL5O94762 991 aaPredicted RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 PCDH8O95206 1070 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 SLC4A1P02730 911 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 BCKDHBP21953 392 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 MCM3P25205 808 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ETV3P41162 512 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ARCN1P48444 511 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 CCR5P51681 352 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 GPX6P59796 221 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 RPS21P63220 83 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 XIAPP98170 497 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CSTF1Q05048 431 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 FRG1Q14331 258 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 ZNF528Q3MIS6 628 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 KIAA0930Q6ICG6 404 aaPredicted RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 CASC4Q6P4E1 433 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CES3Q6UWW8 571 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 UNC5AQ6ZN44 842 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 Q6ZVL8 140 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ZNF765Q7L2R6 523 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 LONP2Q86WA8 852 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CCNJLQ8IV13 435 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 GPR26Q8NDV2 337 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ASB12Q8WXK4 309 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CAVIN3Q969G5 261 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ZNF669Q96BR6 464 aaPredicted RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 C9orf72Q96LT7 481 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 PLEKHG4BQ96PX9 1271 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ORAI3Q9BRQ5 295 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 PCED1AQ9H1Q7 454 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 EPB41L4BQ9H329 900 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 CDC42EP4Q9H3Q1 356 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 BPIFA1Q9NP55 256 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 NINJ2Q9NZG7 142 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 SAMD15Q9P1V8 674 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
VCP-204ENST00000466100 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 COQ6Q9Y2Z9 468 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 MAD1L1Q9Y6D9 718 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 PI4KAP42356 2102 aa11.12□□□□□ -0.63
VCP-204ENST00000466100 TBC1D3DA0A087WVF3 549 aa11.11□□□□□ -0.63
VCP-204ENST00000466100 TBC1D3IA0A087WXS9 549 aa11.11□□□□□ -0.63
VCP-204ENST00000466100 TBC1D3EA0A087X179 549 aa11.11□□□□□ -0.63
VCP-204ENST00000466100 TBC1D3KA0A087X1G2 549 aa11.11□□□□□ -0.63
VCP-204ENST00000466100 TBC1D3FA6NER0 549 aaPredicted RBP11.11□□□□□ -0.63
VCP-204ENST00000466100 PRR23AA6NEV1 266 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms