RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 SSTR1P30872 391 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 LSP1P33241 339 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 HNF1BP35680 557 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 MSH2P43246 934 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 FRG1Q14331 258 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 TMED2Q15363 201 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 C5orf22Q49AR2 442 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 LGSNQ5TDP6 509 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 TTC39BQ5VTQ0 682 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 TMEM215Q68D42 235 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 FBXL19Q6PCT2 694 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 ADGRD1Q6QNK2 874 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 EXOC3L1Q86VI1 746 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 CHSY1Q86X52 802 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 FBF1Q8TES7 1133 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 MAML1Q92585 1016 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 ALKBH8Q96BT7 664 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 CELF6Q96J87 481 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 CNDP2Q96KP4 475 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 PRMT1Q99873 361 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 WDR83Q9BRX9 315 aaKnown RBP13.92□□□□□ -0.18
HDAC6-215ENST00000465457 SAMD15Q9P1V8 674 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 ZNF180Q9UJW8 692 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 FBXO10Q9UK96 956 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 VANGL2Q9ULK5 521 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 UNC79Q9P2D8 2635 aa13.92□□□□□ -0.18
HDAC6-215ENST00000465457 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 MAGEB16A2A368 324 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 POC1B-GALNT4F8VUJ3 575 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 ACSL4O60488 711 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 MAFKO60675 156 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 NEBLO76041 1014 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 EPHX1P07099 455 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 KRT15P19012 456 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 TACR2P21452 398 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 NPY2RP49146 381 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 RENBPP51606 427 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 GEMP55040 296 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 DMTNQ08495 405 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 SKIDA1Q1XH10 827 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 HP1BP3Q5SSJ5 553 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-215ENST00000465457 FYB2Q5VWT5 728 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 STEAP4Q687X5 459 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 Q6ZNB5 142 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 TRABD2AQ86V40 505 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-215ENST00000465457 CDKL2Q92772 493 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 SIGLEC10Q96LC7 697 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-215ENST00000465457 FCRL5Q96RD9 977 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 PAFAH2Q99487 392 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 SLC39A8Q9C0K1 460 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 NRSN2Q9GZP1 204 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 CCDC134Q9H6E4 229 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 NKIRAS1Q9NYS0 192 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 BFARQ9NZS9 450 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 PCDHGA1Q9Y5H4 931 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 MAD1L1Q9Y6D9 718 aa13.91□□□□□ -0.18
HDAC6-215ENST00000465457 UBR5O95071 2799 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-215ENST00000465457 A0A1B0GTQ1 180 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 RASA4BC9J798 803 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 PRPF4O43172 522 aaKnown RBP eCLIP13.9□□□□□ -0.185e-6■■■□□ 18.8
HDAC6-215ENST00000465457 RASA4O43374 803 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SYNCRIPO60506 623 aaKnown RBP13.9□□□□□ -0.18
HDAC6-215ENST00000465457 RAMP2O60895 175 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 BANF1O75531 89 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 FSBPO95073 299 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 PENKP01210 267 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-215ENST00000465457 JCHAINP01591 159 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 KLKB1P03952 638 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 WNT1P04628 370 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 INHBAP08476 426 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 ACADMP11310 421 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 BRAFP15056 766 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 NFKB1P19838 968 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 CNTFP26441 200 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 GCAP28676 217 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SERPINB9P50453 376 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 GUCY1A3Q02108 690 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SRSF1Q07955 248 aaKnown RBP eCLIP13.9□□□□□ -0.181e-10■■■□□ 15.3
HDAC6-215ENST00000465457 ZBTB17Q13105 803 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 TEAD4Q15561 434 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SPANXN3Q5MJ09 141 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 ARTNQ5T4W7 220 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 ARHGAP40Q5TG30 622 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 RAP1GAP2Q684P5 730 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 KCTD11Q693B1 232 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 FBXL22Q6P050 247 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 CAPN12Q6ZSI9 719 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 C14orf80Q86SX3 495 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SLC26A11Q86WA9 606 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 LRRC6Q86X45 466 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 LRRN4Q8WUT4 740 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 FGF11Q92914 225 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 CFAP36Q96G28 342 aa13.9□□□□□ -0.18
HDAC6-215ENST00000465457 SGSM3Q96HU1 749 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms