RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 RHDQ02161 417 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 CFHR1Q03591 330 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 EIF3IQ13347 325 aaKnown RBP13.81□□□□□ -0.2
RPP40-203ENST00000464646 ATP13A4Q4VNC1 1196 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 ODF2Q5BJF6 829 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 KIAA1614Q5VZ46 1190 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 HGSNATQ68CP4 663 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 TIGD7Q6NT04 549 aaPredicted RBP13.81□□□□□ -0.2
RPP40-203ENST00000464646 ZNF605Q86T29 641 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 CCNYQ8ND76 341 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 LRRN4Q8WUT4 740 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 DTD2Q96FN9 168 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 POLR1EQ9GZS1 481 aaKnown RBP13.81□□□□□ -0.2
RPP40-203ENST00000464646 RBM22Q9NW64 420 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPP40-203ENST00000464646 CAPN11Q9UMQ6 739 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 TMEM98Q9Y2Y6 226 aa13.81□□□□□ -0.2
RPP40-203ENST00000464646 DSPP15924 2871 aaKnown RBP13.81□□□□□ -0.2
RPP40-203ENST00000464646 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 ERVH48-1M5A8F1 160 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 INPP4BO15327 924 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 NOBOXO60393 691 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CYP1A2P05177 515 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 HOXC4P09017 264 aaPredicted RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 ITIH1P19827 911 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CR2P20023 1033 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CA4P22748 312 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CASP14P31944 242 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 TRIM23P36406 574 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 ACTR1BP42025 376 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 OR1D5P58170 312 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 ACTR1AP61163 376 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CDK3Q00526 305 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 DSC2Q02487 901 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 SLC25A11Q02978 314 aaKnown RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 LY6DQ14210 128 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CERCAMQ5T4B2 595 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 LRRC66Q68CR7 880 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 USP53Q70EK8 1073 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 SPRED1Q7Z699 444 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 PIM3Q86V86 326 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 MAP7D3Q8IWC1 876 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CTNNBL1Q8WYA6 563 aaPredicted RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 SYN2Q92777 582 aaPredicted RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 AP2M1Q96CW1 435 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 CMKLR1Q99788 373 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 RDH14Q9HBH5 336 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 SPATS2LQ9NUQ6 558 aaKnown RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 TAAR2Q9P1P5 351 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
RPP40-203ENST00000464646 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPP40-203ENST00000464646 COL27A1Q8IZC6 1860 aaPredicted RBP13.8□□□□□ -0.2
RPP40-203ENST00000464646 CELSR3Q9NYQ7 3312 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 CDRT15L2A8MXV6 281 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 ZIC2O95409 532 aaPredicted RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 ECEL1O95672 775 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 PDHA1P08559 390 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 TNNT1P13805 278 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 LHCGRP22888 699 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 CLN3Q13286 438 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 PEX6Q13608 980 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 DPYSL3Q14195 570 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 HLTFQ14527 1009 aaKnown RBP eCLIP13.79□□□□□ -0.2
RPP40-203ENST00000464646 IFI16Q16666 785 aaKnown RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 ANKRD20A8PQ5CZ79 823 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 IGF2-ASQ6U949 168 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 TRIM74Q86UV6 250 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 NIPA2Q8N8Q9 360 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 LPCAT1Q8NF37 534 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 IQCDQ96DY2 449 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 AHCYL2Q96HN2 611 aaKnown RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 CCNL2Q96S94 520 aaPredicted RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 ARHGAP9Q9BRR9 750 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 ANP32EQ9BTT0 268 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 CDH19Q9H159 772 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 ABCG8Q9H221 673 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
RPP40-203ENST00000464646 SEPT10Q9P0V9 454 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 PCDHB11Q9Y5F2 797 aa13.79□□□□□ -0.2
RPP40-203ENST00000464646 PSMD11O00231 422 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 NUDT21O43809 227 aaKnown RBP13.78□□□□□ -0.2
RPP40-203ENST00000464646 PEX11BO96011 259 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 SLC4A1P02730 911 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 CEACAM5P06731 702 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 KRT7P08729 469 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 TPM1P09493 284 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 PNLIPP16233 465 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 ADCY8P40145 1251 aa13.78□□□□□ -0.2
RPP40-203ENST00000464646 MLLT3P42568 568 aaPredicted RBP13.78□□□□□ -0.2
RPP40-203ENST00000464646 CTBSQ01459 385 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms