RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 DGUOKQ16854 277 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 RFX4Q33E94 735 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 DCAF4L1Q3SXM0 396 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 AARS2Q5JTZ9 985 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF618Q5T7W0 954 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 AGAP7PQ5VUJ5 663 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 THOC7Q6I9Y2 204 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 C8orf82Q6P1X6 216 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TUBA3EQ6PEY2 450 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ELMSAN1Q6PJG2 1045 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 METTL7BQ6UX53 244 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SMIM5Q71RC9 77 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ARMCX2Q7L311 632 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 DPH6Q7L8W6 267 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GALNT7Q86SF2 657 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ZC3HC1Q86WB0 502 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 DDIASQ8IXT1 998 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CLYBLQ8N0X4 340 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF567Q8N184 647 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CHCHD4Q8N4Q1 142 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PCDH20Q8N6Y1 951 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 LRRC52Q8N7C0 313 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 C1orf127Q8N9H9 656 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 PAPD5Q8NDF8 572 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SPPL2BQ8TCT7 592 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 USP33Q8TEY7 942 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GIPC2Q8TF65 315 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 RNF139Q8WU17 664 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC35F5Q8WV83 523 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 NTAN1Q96AB6 310 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TMIGD2Q96BF3 282 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TAMM41Q96BW9 452 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 VMP1Q96GC9 406 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 AURKBQ96GD4 344 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ZNF641Q96N77 438 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 C11orf84Q9BUA3 381 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CDT1Q9H211 546 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 EHD1Q9H4M9 534 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 RMI1Q9H9A7 625 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CPNE5Q9HCH3 593 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 IARS2Q9NSE4 1012 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 GPATCH2LQ9NWQ4 482 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TRNAU1APQ9NX07 287 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SEPT10Q9P0V9 454 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 XPR1Q9UBH6 696 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SIX4Q9UIU6 781 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 MAGEL2Q9UJ55 1249 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 FZD10Q9ULW2 581 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC6A14Q9UN76 642 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 MAGED2Q9UNF1 606 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 AURKCQ9UQB9 309 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 TDRKHQ9Y2W6 561 aaKnown RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 ORC6Q9Y5N6 252 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 COL11A2P13942 1736 aaPredicted RBP7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 CNTNAP1P78357 1384 aa7.2□□□□□ -1.26
CLSTN1-204ENST00000464286 IGKV6-21A0A0C4DH24 114 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 C1orf232A0A0U1RR37 186 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ZCWPW2A0A1B0GU75 182 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 FAM95CA0A1B0GW59 222 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 A0A1W2PPW3 197 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 RBM47A0AV96 593 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 PRORSD1PA6NEY8 169 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 TBKBP1A7MCY6 615 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 TARM1B6A8C7 271 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 M0QX08 132 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 DLX3O60479 287 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 TIPRLO75663 272 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 IPO13O94829 963 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ATE1O95260 518 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 TOP3BO95985 862 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CHEK2O96017 543 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 GSNP06396 782 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 LTA4HP09960 611 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 STAG3L1P0CL83 205 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CXCL8P10145 99 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 NFKB1P19838 968 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CYP2B6P20813 491 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ADORA2AP29274 412 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 GRIA1P42261 906 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 SULT1E1P49888 294 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CCT8P50990 548 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CCR3P51677 355 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC7A2P52569 658 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 GEMP55040 296 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CDH8P55286 799 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 CDC42EP1Q00587 391 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 MVKQ03426 396 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 SCAPQ12770 1279 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 SLC10A2Q12908 348 aaPredicted RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ITGADQ13349 1161 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 PMS2P3Q13401 168 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 GRM3Q14832 879 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 ACOX1Q15067 660 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 OXA1LQ15070 435 aa7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 PCBP1Q15365 356 aaKnown RBP eCLIP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 FSCN1Q16658 493 aaKnown RBP7.19□□□□□ -1.26
CLSTN1-204ENST00000464286 KIF19Q2TAC6 998 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms