RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 SCUBE2Q9NQ36 999 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 NLE1Q9NVX2 485 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 FAM50BQ9Y247 325 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CRTAMO95727 393 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 PRLP01236 227 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 HDCP19113 662 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 OGNP20774 298 aaKnown RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CDKN1CP49918 316 aaPredicted RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 MS4A2Q01362 244 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 KIAA1841Q6NSI8 718 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 CYHR1Q6ZMK1 362 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.36■□□□□ 0.852e-7■■□□□ 13.5
TUBGCP3-204ENST00000464139 GDPD5Q8WTR4 605 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 DLGAP2Q9P1A6 1054 aa20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 AGO1Q9UL18 857 aaKnown RBP20.36■□□□□ 0.85
TUBGCP3-204ENST00000464139 A0A0U1RQS6 177 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 C2orf78A6NCI8 922 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 PITPNM1O00562 1244 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 CR2P20023 1033 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 HERVK_113P63132 956 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 GALNT1Q10472 559 aaPredicted RBP20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 PFKFB4Q16877 469 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 SFT2D3Q587I9 215 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 RNF219Q5W0B1 726 aaPredicted RBP20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 LINGO4Q6UY18 593 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 SLAIN1Q8ND83 568 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 PDZD8Q8NEN9 1154 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 LPCAT1Q8NF37 534 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 CLSTN3Q9BQT9 956 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 ERVK-6Q9BXR3 956 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 CCDC167Q9P0B6 97 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 FNDC3AQ9Y2H6 1198 aaKnown RBP20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 GPC4O75487 556 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 PLD1Q13393 1074 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 FLOT2Q14254 428 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 TRIP10Q15642 601 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 TYSND1Q2T9J0 566 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 SPDL1Q96EA4 605 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 TDRD1Q9BXT4 1180 aaKnown RBP20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 PPP1R12CQ9BZL4 782 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 MUC3BQ9H195 1237 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 SMPD4Q9NXE4 827 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 TRPM5Q9NZQ8 1165 aa20.35■□□□□ 0.85
TUBGCP3-204ENST00000464139 ILVBLA1L0T0 632 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 RHOBTB1O94844 696 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 MTHFD2P13995 350 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 TCN1P20061 433 aaPredicted RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 SUOXP51687 545 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 SH3BP2P78314 561 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 AGKQ53H12 422 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 PAQR3Q6TCH7 311 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 PCDH20Q8N6Y1 951 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 FAM156AQ8NDB6 213 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 PLD4Q96BZ4 506 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 C3orf30Q96M34 536 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 TRMOQ9BU70 441 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 EBF3Q9H4W6 596 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 FBRSL1Q9HCM7 1045 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 RIMKLBQ9ULI2 386 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 UBTFL6P0CB48 400 aaPredicted RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 HSPA1AP0DMV8 641 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 HSPA1BP0DMV9 641 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 PAX7P23759 505 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 ATN1P54259 1190 aaPredicted RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 INHBCP55103 352 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 NFKB2Q00653 900 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 FASTKQ14296 549 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 SETMARQ53H47 684 aaPredicted RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 FBXO48Q5FWF7 155 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 NSUN5Q96P11 429 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 MRPL1Q9BYD6 325 aaKnown RBP20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 VPS28Q9UK41 221 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 MED16Q9Y2X0 877 aa20.34■□□□□ 0.85
TUBGCP3-204ENST00000464139 PSMD12O00232 456 aaPredicted RBP20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 SNAP91O60641 907 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 LINGO3P0C6S8 592 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 MRPS22P82650 360 aaKnown RBP20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 SQLEQ14534 574 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 TAF12Q16514 161 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 ADGRF1Q5T601 910 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 PDSS2Q86YH6 399 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 EFHBQ8N7U6 833 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 LPGAT1Q92604 370 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 GATA6Q92908 595 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 KLHL4Q9C0H6 718 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 GALPQ9UBC7 116 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 IKZF3Q9UKT9 509 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 RAI2Q9Y5P3 530 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 PTGDR2Q9Y5Y4 395 aa20.33■□□□□ 0.85
TUBGCP3-204ENST00000464139 A0A1B0GVM2 712 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 SRP72O76094 671 aaKnown RBP20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 EFEMP2O95967 443 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 PENKP01210 267 aaPredicted RBP20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 ME2P23368 584 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 ARF5P84085 180 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 TAF1AQ15573 450 aaPredicted RBP20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 CXorf57Q6NSI4 855 aaKnown RBP20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 OR9I1Q8NGQ6 314 aa20.33■□□□□ 0.84
TUBGCP3-204ENST00000464139 OVCA2Q8WZ82 227 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms