RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 SNAP47Q5SQN1 464 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 DPY19L2P1Q6NXN4 242 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 BMPERQ8N8U9 685 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 STARD8Q92502 1023 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 COQ10AQ96MF6 247 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 SLC38A3Q99624 504 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 CINPQ9BW66 212 aaPredicted RBP14.45□□□□□ -0.1
SMC1A-204ENST00000463684 STK33Q9BYT3 514 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
SMC1A-204ENST00000463684 FBXO8Q9NRD0 319 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 PDP2Q9P2J9 529 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 FZD10Q9ULW2 581 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 VPS4AQ9UN37 437 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 TP53TG5Q9Y2B4 290 aa14.45□□□□□ -0.1
SMC1A-204ENST00000463684 GOLGA6CA6NDK9 693 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 GOLGA6BA6NDN3 693 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 ENO4A6NNW6 628 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 F8VZ95 297 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 STK17BO94768 372 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 CYP1A1P04798 512 aaPredicted RBP14.44□□□□□ -0.1
SMC1A-204ENST00000463684 GOLGA6DP0CG33 693 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 NFKBIAP25963 317 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 POLD2P49005 469 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 PAPOLAP51003 745 aaKnown RBP14.44□□□□□ -0.1
SMC1A-204ENST00000463684 SCNN1BP51168 640 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 AIF1P55008 147 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 CDK3Q00526 305 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 CDR2Q01850 454 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 HIST2H2BCQ6DN03 193 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 WDR59Q6PJI9 974 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 TIPARPQ7Z3E1 657 aaKnown RBP14.44□□□□□ -0.1
SMC1A-204ENST00000463684 CELF6Q96J87 481 aaKnown RBP14.44□□□□□ -0.1
SMC1A-204ENST00000463684 TUBGCP2Q9BSJ2 902 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 NAA15Q9BXJ9 866 aaKnown RBP14.44□□□□□ -0.1
SMC1A-204ENST00000463684 LRRC19Q9H756 370 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 PRDM8Q9NQV8 689 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 GOLGA6AQ9NYA3 693 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 B4GALT6Q9UBX8 382 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 LRRK1Q38SD2 2015 aa14.44□□□□□ -0.1
SMC1A-204ENST00000463684 UTP20O75691 2785 aaKnown RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TRBV23OR9-2A0A075B6M9 112 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TRAFD1O14545 582 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 POLR1CO15160 346 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 GFPT2O94808 682 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 IVLP07476 585 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 HTR7P34969 479 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TPI1P60174 286 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 RFTN1Q14699 578 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ATP1A1-AS1Q5TC04 95 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 FHL5Q5TD97 284 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TCTN3Q6NUS6 607 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 WDR74Q6RFH5 385 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TRIM72Q6ZMU5 477 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ASB18Q6ZVZ8 466 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ARHGAP22Q7Z5H3 698 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 CCDC13Q8IYE1 715 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ESX1Q8N693 406 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 SLC20A1Q8WUM9 679 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 SLC39A8Q9C0K1 460 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ADAM22Q9P0K1 906 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 NOCTQ9UK39 431 aaKnown RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 SLC17A4Q9Y2C5 497 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 TMEM184BQ9Y519 407 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 ST14Q9Y5Y6 855 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 KCNMB2Q9Y691 235 aa14.43□□□□□ -0.1
SMC1A-204ENST00000463684 USP9YO00507 2555 aaPredicted RBP14.43□□□□□ -0.1
SMC1A-204ENST00000463684 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.42□□□□□ -0.1
SMC1A-204ENST00000463684 A0A1W2PQ67 120 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 DESP17661 470 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 NR1D1P20393 614 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 VIPR1P32241 457 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 ETV3P41162 512 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 NSFP46459 744 aaKnown RBP14.42□□□□□ -0.1
SMC1A-204ENST00000463684 FASLGP48023 281 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 RENBPP51606 427 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 AP1S1P61966 158 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 FMO1Q01740 532 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 CNGA3Q16281 694 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 MIIPQ5JXC2 388 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 RAET1GQ6H3X3 334 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 DOK6Q6PKX4 331 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 ZNF761Q86XN6 746 aaPredicted RBP14.42□□□□□ -0.1
SMC1A-204ENST00000463684 PDCD6IPQ8WUM4 868 aaKnown RBP14.42□□□□□ -0.1
SMC1A-204ENST00000463684 PTCD2Q8WV60 388 aaKnown RBP14.42□□□□□ -0.1
SMC1A-204ENST00000463684 NCSTNQ92542 709 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 DTD2Q96FN9 168 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 SP110Q9HB58 689 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 KIAA1468Q9P260 1216 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 PLEKHM1Q9Y4G2 1056 aa14.42□□□□□ -0.1
SMC1A-204ENST00000463684 ANKRD36A6QL64 1941 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 SIGLEC16A6NMB1 481 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 DAPK3O43293 454 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 CCP110O43303 1012 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 HEXIM1O94992 359 aaKnown RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 CALB1P05937 261 aa14.41□□□□□ -0.1
SMC1A-204ENST00000463684 CYP2A6P11509 494 aaPredicted RBP14.41□□□□□ -0.1
SMC1A-204ENST00000463684 CHRNB2P17787 502 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms