RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 SMIM14Q96QK8 99 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 ABCG8Q9H221 673 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
C9orf3-210ENST00000462125 PHPT1Q9NRX4 125 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-210ENST00000462125 DNPEPQ9ULA0 475 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 PCDHB1Q9Y5F3 818 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 PCDHA13Q9Y5I0 950 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 HEY1Q9Y5J3 304 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 AK5Q9Y6K8 562 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 APC2O95996 2303 aa13.2□□□□□ -0.3
C9orf3-210ENST00000462125 DSPP15924 2871 aaKnown RBP13.2□□□□□ -0.3
C9orf3-210ENST00000462125 CELSR3Q9NYQ7 3312 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 ACACAQ13085 2346 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 MYLKQ15746 1914 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 NBEAQ8NFP9 2946 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 A0A0A6YYK5 440 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 A0A0U1RQS6 177 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 ANKRD66B4E2M5 251 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 KCNK1O00180 336 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 NTN3O00634 580 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 CSO75390 466 aaKnown RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 TCEA3O75764 348 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 SOD1P00441 154 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 CA4P22748 312 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 FECHP22830 423 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 CDKN2BP42772 138 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 NR2C2P49116 596 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 GSDMDP57764 484 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 SKOR1P84550 965 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 CDK3Q00526 305 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 LRRC66Q68CR7 880 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 DENND2CQ68D51 928 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 MFSD7Q6UXD7 560 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 RFLNAQ6ZTI6 216 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 ZNF765Q7L2R6 523 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 NRSN1Q8IZ57 195 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 GPBAR1Q8TDU6 330 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 TADA1Q96BN2 335 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 ZNF830Q96NB3 372 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 PANX2Q96RD6 677 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 FRMD8Q9BZ67 464 aaPredicted RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 TMEM168Q9H0V1 697 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 PCDH9Q9HC56 1237 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 CYP4F12Q9HCS2 524 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
C9orf3-210ENST00000462125 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 GULP1Q9UBP9 304 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 GPR34Q9UPC5 381 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 SLC17A4Q9Y2C5 497 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 HYOU1Q9Y4L1 999 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 SHROOM3Q8TF72 1996 aa13.19□□□□□ -0.3
C9orf3-210ENST00000462125 PRSS38A1L453 326 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 CAPN8A6NHC0 703 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 TLX3O43711 291 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 NRDCO43847 1150 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 DXOO77932 396 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 KRT1P04264 644 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 PNLIPP16233 465 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 EIF2S3P41091 472 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 LSSP48449 732 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 STC1P52823 247 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 EPHB1P54762 984 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 ZBTB17Q13105 803 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 NPNTQ6UXI9 565 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 BZW1Q7L1Q6 419 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 RFX6Q8HWS3 928 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 LSMEM2Q8N112 164 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 FAM46DQ8NEK8 389 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 CCL4L1Q8NHW4 92 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 SNIP1Q8TAD8 396 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 FGF11Q92914 225 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 COL26A1Q96A83 441 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 AP2M1Q96CW1 435 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 IMP4Q96G21 291 aaKnown RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 SCARF2Q96GP6 870 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 APPL1Q9UKG1 709 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 TTLL3Q9Y4R7 772 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 ENTPD2Q9Y5L3 495 aa13.18□□□□□ -0.3
C9orf3-210ENST00000462125 EPN1Q9Y6I3 576 aaPredicted RBP13.18□□□□□ -0.3
C9orf3-210ENST00000462125 RGSL1A5PLK6 1076 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 PPP1R12AO14974 1030 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 PSTPIP1O43586 416 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 SPOPO43791 374 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-210ENST00000462125 NOBOXO60393 691 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 BRINP1O60477 761 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 USP12O75317 370 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 CLDN7O95471 211 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 PYGLP06737 847 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 IVLP07476 585 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 GLB1P16278 677 aa13.17□□□□□ -0.3
C9orf3-210ENST00000462125 CD86P42081 329 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms