RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 C12orf65Q9H3J6 166 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 EML4Q9HC35 981 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 INTS10Q9NVR2 710 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 THAP1Q9NVV9 213 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 XPR1Q9UBH6 696 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SUN2Q9UH99 717 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GNPTGQ9UJJ9 305 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 RIMKLBQ9ULI2 386 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 RNF112Q9ULX5 631 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 APOBEC2Q9Y235 224 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TANC1Q9C0D5 1861 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SYCE1LA8MT33 242 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TYROBPO43914 113 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RFPL1O75677 317 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZMPSTE24O75844 475 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HAUS5O94927 633 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ARHGEF15O94989 841 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CHEK2O96017 543 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PENKP01210 267 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 AHSGP02765 367 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 F7P08709 466 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ATXN1LP0C7T5 689 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TPBGLP0DKB5 382 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ARSAP15289 507 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PSMC3P17980 439 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ITGB6P18564 788 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TFEBP19484 476 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MSH3P20585 1137 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GCAP28676 217 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CTSOP43234 321 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ARSDP51689 593 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 IL2P60568 153 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PFKPQ01813 784 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SFSWAPQ12872 951 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RUNX3Q13761 415 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MPP2Q14168 576 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 RCN2Q14257 317 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PTPRCAPQ14761 206 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 DBN1Q16643 649 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 FUT11Q495W5 492 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ARSIQ5FYB1 569 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ANKRD54Q6NXT1 300 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZCCHC23Q6ZST2 131 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TPRG1Q6ZUI0 275 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ACAD11Q709F0 780 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 OTOAQ7RTW8 1153 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CILP2Q8IUL8 1156 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC22A9Q8IVM8 553 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 AGGF1Q8N302 714 aaeCLIP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NKAPQ8N5F7 415 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF366Q8N895 744 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SORCS1Q8WY21 1168 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ISG20Q96AZ6 181 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ULK4Q96C45 1275 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ASB16Q96NS5 453 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MRPL57Q9BQC6 102 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZCCHC2Q9C0B9 1178 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ILKAPQ9H0C8 392 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF576Q9H609 170 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CCDC134Q9H6E4 229 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ACTR5Q9H9F9 607 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 MAGEE1Q9HCI5 957 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SLCO1B3Q9NPD5 702 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TXLNGQ9NUQ3 528 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NLE1Q9NVX2 485 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 NCKIPSDQ9NZQ3 722 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CD274Q9NZQ7 290 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF212Q9UDV6 495 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 HS3ST2Q9Y278 367 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 DNAJC16Q9Y2G8 782 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PCDHB1Q9Y5F3 818 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SPO11Q9Y5K1 396 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GOLGA8QA0A0J9YX86 632 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 A0A0J9YYE9 177 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 EDDM13A0A1B0GTR0 161 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GOLGA8OA6NCC3 632 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PRR23AA6NEV1 266 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CAPN8A6NHC0 703 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CCT8L1PA6NM43 557 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 UPK3BL1B0FP48 263 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 UPK3BL2E5RIL1 263 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GOLGA8NF8WBI6 632 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 BTN3A1O00481 513 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SNX3O60493 162 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CCDC22O60826 627 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 EDF1O60869 148 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 GJB3O75712 270 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SUPT7LO94864 414 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PCDH8O95206 1070 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 TRBC1P01850 177 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ESR1P03372 595 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ALDOAP04075 364 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SRPRAP08240 638 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 OR56A5P0C7T3 313 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 ATP5F1P24539 256 aaPredicted RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 CCNFP41002 786 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 SKIV2L2P42285 1042 aaKnown RBP4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 WASP42768 502 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PTGER3P43115 390 aa4.11□□□□□ -1.75
ATP13A3-206ENST00000461660 PSMD8P48556 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms