RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 MARCKSL1P49006 195 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 DYNLT1P63172 113 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 SKOR1P84550 965 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 RHDQ02161 417 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 NIPAL4Q0D2K0 466 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 AP1B1Q10567 949 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 INPP5AQ14642 412 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 CNGA3Q16281 694 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 ARHGAP40Q5TG30 622 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 USP45Q70EL2 814 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 LSMEM2Q8N112 164 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 KIAA1524Q8TCG1 905 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 BTN2A2Q8WVV5 523 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 KRT35Q92764 455 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 RBM41Q96IZ5 413 aaKnown RBP18.41■□□□□ 0.54
COL9A2-205ENST00000461118 TBATAQ96M53 351 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 DEPDC7Q96QD5 511 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 APOOQ9BUR5 198 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 TDRD1Q9BXT4 1180 aaKnown RBP18.41■□□□□ 0.54
COL9A2-205ENST00000461118 PCDHA3Q9Y5H8 950 aa18.41■□□□□ 0.54
COL9A2-205ENST00000461118 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 A8MX80 341 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 PRLP01236 227 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 MMP2P08253 660 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 HOXC4P09017 264 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 JUNDP17535 347 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 CA4P22748 312 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 CTNNA1P35221 906 aaKnown RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 TRIM23P36406 574 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 COPS2P61201 443 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 RPL26P61254 145 aaKnown RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 ADCY2Q08462 1091 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 ZBTB17Q13105 803 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 PPP2R5EQ16537 467 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 IGF2-ASQ6U949 168 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 TXLNBQ8N3L3 684 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 LRRC57Q8N9N7 239 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 ZNF548Q8NEK5 533 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 PRR11Q96HE9 360 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 PNMA8BQ9ULN7 279 aaPredicted RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 RPL26L1Q9UNX3 145 aaKnown RBP18.4■□□□□ 0.54
COL9A2-205ENST00000461118 TTLL3Q9Y4R7 772 aa18.4■□□□□ 0.54
COL9A2-205ENST00000461118 SCN8AQ9UQD0 1980 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 A0A0J9YYE9 177 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 NPIPB15A6NHN6 443 aaPredicted RBP18.39■□□□□ 0.53
COL9A2-205ENST00000461118 GOLGA6L6A8MZA4 724 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 TRBC1P01850 177 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 LHCGRP22888 699 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 HTR1BP28222 390 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 UCNP55089 124 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 NAP1L1P55209 391 aaKnown RBP18.39■□□□□ 0.53
COL9A2-205ENST00000461118 NFATC4Q14934 902 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 ACOX1Q15067 660 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 PRKD1Q15139 912 aaPredicted RBP18.39■□□□□ 0.53
COL9A2-205ENST00000461118 ISXQ2M1V0 245 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 ESRP1Q6NXG1 681 aaKnown RBP18.39■□□□□ 0.53
COL9A2-205ENST00000461118 KIAA1328Q86T90 577 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 PLA2G15Q8NCC3 412 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 KCNE4Q8WWG9 221 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 SAE1Q9UBE0 346 aaPredicted RBP18.39■□□□□ 0.53
COL9A2-205ENST00000461118 CHKBQ9Y259 395 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 EFR3BQ9Y2G0 817 aa18.39■□□□□ 0.53
COL9A2-205ENST00000461118 CCDC66A2RUB6 948 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 CAPN8A6NHC0 703 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 TPP1O14773 563 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 CASC3O15234 703 aaKnown RBP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 KLK10O43240 276 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 AQP9O43315 295 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PCCBP05166 539 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 ALPPL2P10696 532 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PECAM1P16284 738 aaPredicted RBP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 CTNNA2P26232 953 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 BLKP51451 505 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 GSDMDP57764 484 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PPARDQ03181 441 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 KIF5AQ12840 1032 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 ARHGEF7Q14155 803 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 LY6DQ14210 128 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 TEX44Q53QW1 395 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 TAF1BQ53T94 588 aaPredicted RBP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 BROXQ5VW32 411 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 KAZNQ674X7 775 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PNCKQ6P2M8 343 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 CRTC1Q6UUV9 634 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 BBS12Q6ZW61 710 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 HSD11B1LQ7Z5J1 315 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 TECPR1Q7Z6L1 1165 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 RAVER1Q8IY67 606 aaKnown RBP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PHACTR4Q8IZ21 702 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 IFI44Q8TCB0 444 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 P3H4Q92791 437 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 DTD2Q96FN9 168 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 IMP4Q96G21 291 aaKnown RBP18.38■□□□□ 0.53
COL9A2-205ENST00000461118 LYSMD1Q96S90 227 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 DUSP23Q9BVJ7 150 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 DPH1Q9BZG8 443 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 USP29Q9HBJ7 922 aa18.38■□□□□ 0.53
COL9A2-205ENST00000461118 PCDH9Q9HC56 1237 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms