RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 CERCAMQ5T4B2 595 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 VSTM4Q8IW00 320 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 FAM46DQ8NEK8 389 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCL4L1Q8NHW4 92 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 WDR36Q8NI36 951 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 SLC35G2Q8TBE7 412 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 ARRDC2Q8TBH0 407 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 GPBAR1Q8TDU6 330 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 HDAC11Q96DB2 347 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 LIN37Q96GY3 246 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 BBC3Q96PG8 261 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 RNF157Q96PX1 679 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 GFM1Q96RP9 751 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 LGMNQ99538 433 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 TDRD1Q9BXT4 1180 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 FRMD8Q9BZ67 464 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 DEF6Q9H4E7 631 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 RBM22Q9NW64 420 aaKnown RBP eCLIP11.79□□□□□ -0.521e-38■■■■■ 43.7
SOX2-OT-201ENST00000460739 TRNAU1APQ9NX07 287 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 MOSPD1Q9UJG1 213 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZFC3H1O60293 1989 aaKnown RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCDC187A0A096LP49 1063 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 CDRT15L2A8MXV6 281 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNF487B1APH4 448 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 D6RAR5 112 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 NUDT21O43809 227 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 MFAP3LO75121 409 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 MTA2O94776 668 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SOD1P00441 154 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RPLP0P05388 317 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 HLA-DQB2P05538 268 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 TPM1P09493 284 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNF30P17039 623 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RBMS1P29558 406 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ARHGAP25P42331 645 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RPL26P61254 145 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCL7P80098 99 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SKOR1P84550 965 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 CDK3Q00526 305 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 DSC2Q02487 901 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 PTSQ03393 145 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 HLTFQ14527 1009 aaKnown RBP eCLIP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 MESDQ14696 234 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 LRRC66Q68CR7 880 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RAET1GQ6H3X3 334 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ADAMTSL4Q6UY14 1074 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNF765Q7L2R6 523 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 B3GNT8Q7Z7M8 397 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 NLRP8Q86W28 1048 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 C17orf82Q86X59 251 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 VSIG1Q86XK7 387 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 NRROSQ86YC3 692 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RHOT2Q8IXI1 618 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RAVER1Q8IY67 606 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RAPGEF5Q92565 580 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SCARF2Q96GP6 870 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 FCRL3Q96P31 734 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 CHP1Q99653 195 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 ABCG8Q9H221 673 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 DPEP2Q9H4A9 486 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SYNDIG1Q9H7V2 258 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 NHEJ1Q9H9Q4 299 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 CARS2Q9HA77 564 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 DTLQ9NZJ0 730 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 DNPEPQ9ULA0 475 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 SLC17A4Q9Y2C5 497 aa11.78□□□□□ -0.52
SOX2-OT-201ENST00000460739 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 A0A0U1RQS6 177 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 PMS2P1A4D2B8 440 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CAPN8A6NHC0 703 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 C3orf70A6NLC5 250 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 B4DGG1 531 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 TMX2-CTNND1H3BSU7 103 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 PRLP01236 227 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 IVLP07476 585 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CA4P22748 312 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CCKBRP32239 447 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 GPR1P46091 355 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 STC1P52823 247 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 EPHB1P54762 984 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 PPIDQ08752 370 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 NIPAL4Q0D2K0 466 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 ILF3Q12906 894 aaKnown RBP eCLIP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 EIF3IQ13347 325 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 COL9A2Q14055 689 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 ZFYVE27Q5T4F4 411 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 SLC9A4Q6AI14 798 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 RFLNAQ6ZTI6 216 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 SPRED1Q7Z699 444 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CLEC14AQ86T13 490 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CCNJLQ8IV13 435 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 CCDC13Q8IYE1 715 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.77□□□□□ -0.53
SOX2-OT-201ENST00000460739 PLD5Q8N7P1 536 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms