RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 SCTRP47872 440 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SLC12A2P55011 1212 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ABCE1P61221 599 aaKnown RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ECT2LQ008S8 904 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 PFKPQ01813 784 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 CACNG1Q06432 222 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 RAD51Q06609 339 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ITGA9Q13797 1035 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SETDB1Q15047 1291 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SPRED3Q2MJR0 410 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SETMARQ53H47 684 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TECRLQ5HYJ1 363 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 AARS2Q5JTZ9 985 aaKnown RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ZDHHC20Q5W0Z9 365 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TMEM215Q68D42 235 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TPRG1Q6ZUI0 275 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TBC1D1Q86TI0 1168 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ISCA2Q86U28 154 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 CAMK1DQ8IU85 385 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 RNF135Q8IUD6 432 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 NPAS3Q8IXF0 933 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ETFBKMTQ8IXQ9 262 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 STK40Q8N2I9 435 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 GPATCH11Q8N954 259 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 RFWD2Q8NHY2 731 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 RHEBL1Q8TAI7 183 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 FRS2Q8WU20 508 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 HEXDCQ8WVB3 486 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 KCTD4Q8WVF5 259 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SMARCD2Q92925 531 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 SKA1Q96BD8 255 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 NXNL1Q96CM4 212 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 RSPRY1Q96DX4 576 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 PDLIM5Q96HC4 596 aaKnown RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ELMO2Q96JJ3 720 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ASB16Q96NS5 453 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 BIRC8Q96P09 236 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 LRRC37BQ96QE4 947 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 FAM83CQ9BQN1 747 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TUBB6Q9BUF5 446 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 GATA5Q9BWX5 397 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 P2RY12Q9H244 342 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 TFB2MQ9H5Q4 396 aaKnown RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 PIDD1Q9HB75 910 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ZFYVE1Q9HBF4 777 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 NPHS2Q9NP85 383 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 POLR3BQ9NW08 1133 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 NFKBIL1Q9UBC1 381 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 HECAQ9UBI9 543 aaPredicted RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 APPL1Q9UKG1 709 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 ERVW-1Q9UQF0 538 aa8.04□□□□□ -1.12
SFPQ-202ENST00000460428 OAS3Q9Y6K5 1087 aaKnown RBP8.04□□□□□ -1.12
SFPQ-202ENST00000460428 NEDD8-MDP1E9PL57 170 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 TK2O00142 265 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 CCL22O00626 93 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 GAPDHSO14556 408 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ITM2AO43736 263 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 DLX3O60479 287 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 HNRNPCL1O60812 293 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ESR1P03372 595 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 CYP17A1P05093 508 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 PKMP14618 531 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 CD1DP15813 335 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ZNF37AP17032 561 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 POLR2EP19388 210 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ATP5F1P24539 256 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 BMP8BP34820 402 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 GMPRP36959 345 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ABL2P42684 1182 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 PTGER3P43115 390 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 CDKN2DP55273 166 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 NAA20P61599 178 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 POLR2LP62875 67 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 IRX4P78413 519 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 NFKB2Q00653 900 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 OVGP1Q12889 678 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 PDGFRLQ15198 375 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 SMAD1Q15797 465 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 PTPRNQ16849 979 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 CTC1Q2NKJ3 1217 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 GAB4Q2WGN9 574 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 GPR33Q49SQ1 333 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 FAM78AQ5JUQ0 283 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ZNF697Q5TEC3 545 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 LYPLAL1Q5VWZ2 237 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 GRAMD4Q6IC98 578 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 KLC3Q6P597 504 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 TMEM207Q6UWW9 146 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 NAPRTQ6XQN6 538 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 PIWIL4Q7Z3Z4 852 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 SNX20Q7Z614 316 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 RBM23Q86U06 439 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 LDB1Q86U70 411 aaPredicted RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 ZSWIM9Q86XI8 627 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 SLC22A9Q8IVM8 553 aa8.03□□□□□ -1.12
SFPQ-202ENST00000460428 WDR75Q8IWA0 830 aaKnown RBP8.03□□□□□ -1.12
SFPQ-202ENST00000460428 KIRREL3Q8IZU9 778 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms