RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CBSP35520 551 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 ARL1P40616 181 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 MSH2P43246 934 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 RFX2P48378 723 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 ENTPD1P49961 510 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 GNAQP50148 359 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 LIMK1P53667 647 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 EIF3BP55884 814 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 POLR2FP61218 127 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 PPARDQ03181 441 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 AP1B1Q10567 949 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 PRPF4BQ13523 1007 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 HNF4GQ14541 408 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 WTAPQ15007 396 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 TAF7Q15545 349 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 HIST2H2ACQ16777 129 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 SOWAHAQ2M3V2 549 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 SETMARQ53H47 684 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 AWAT2Q6E213 333 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 TATDN1Q6P1N9 297 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 TRILQ7L0X0 811 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 MON1BQ7L1V2 547 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 CPLX4Q7Z7G2 160 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 MB21D2Q8IYB1 491 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 OR8H3Q8N146 312 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 PELI3Q8N2H9 469 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 PARP16Q8N5Y8 322 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 NAT8LQ8N9F0 302 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 MIGA1Q8NAN2 632 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 TMEM163Q8TC26 289 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 ADAMTS15Q8TE58 950 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 SNAPC3Q92966 411 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 PABPC5Q96DU9 382 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 SIN3AQ96ST3 1273 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 PIP5K1AQ99755 562 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 MXRA8Q9BRK3 442 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 RBM38Q9H0Z9 239 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 BRF2Q9HAW0 419 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 CCDC177Q9NQR7 707 aaPredicted RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 ADD3Q9UEY8 706 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 SH3BGRL2Q9UJC5 107 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 MOSPD1Q9UJG1 213 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 RPS6KA6Q9UK32 745 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 FBXL5Q9UKA1 691 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 FAM96BQ9Y3D0 163 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 SRPRBQ9Y5M8 271 aaKnown RBP3.45□□□□□ -1.86
VPS8-215ENST00000460158 CAPN7Q9Y6W3 813 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 A3GALT2U3KPV4 340 aa3.45□□□□□ -1.86
VPS8-215ENST00000460158 EIF4G1Q04637 1599 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 ATAD2BQ9ULI0 1458 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CD8B2A6NJW9 211 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 KDM4EB2RXH2 506 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 INAFM1C9JVW0 142 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 TAF4O00268 1085 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 PLOD2O00469 737 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 BCAT2O15382 392 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 ITM2AO43736 263 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 TPPPO94811 219 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 MT-CYBP00156 380 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 TFP02787 698 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CLEC3BP05452 202 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 IGKV2-30P06310 120 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 IRF1P10914 325 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 SCG2P13521 617 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ITGAXP20702 1163 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 MYF6P23409 242 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CHMP24386 653 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 HADHAP40939 763 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CD86P42081 329 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 HDAC4P56524 1084 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 COX10Q12887 443 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 TMEM115Q12893 351 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 LRMPQ12912 555 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 GPS2Q13227 327 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ERV3-1Q14264 604 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ARHGEF6Q15052 776 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 GSTA3Q16772 222 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 MMEL1Q495T6 779 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 DNTTIP2Q5QJE6 756 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 FNBP1LQ5T0N5 605 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 OTUD1Q5VV17 481 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 DAB2IPQ5VWQ8 1189 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 RPUSD3Q6P087 351 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 CDC73Q6P1J9 531 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 ALKBH5Q6P6C2 394 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 TMTC3Q6ZXV5 915 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 PATL1Q86TB9 770 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 SLC9B2Q86UD5 537 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 CCDC170Q8IYT3 715 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 SPC24Q8NBT2 197 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 UTP15Q8TED0 518 aaKnown RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 OIT3Q8WWZ8 545 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 SYAP1Q96A49 352 aaPredicted RBP3.44□□□□□ -1.86
VPS8-215ENST00000460158 PERPQ96FX8 193 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 TSGA13Q96PP4 275 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 H2AFJQ9BTM1 129 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 C2orf40Q9H1Z8 148 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 OR10A4Q9H209 315 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 PLEKHA4Q9H4M7 779 aa3.44□□□□□ -1.86
VPS8-215ENST00000460158 SUDS3Q9H7L9 328 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms