RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 HCAR2Q8TDS4 363 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 STAMBPL1Q96FJ0 436 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 FAM129BQ96TA1 746 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 EBNA1BP2Q99848 306 aaKnown RBP12.79□□□□□ -0.36
C4A-244ENST00000460060 NAT9Q9BTE0 207 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
C4A-244ENST00000460060 PPM1HQ9ULR3 514 aa12.79□□□□□ -0.36
C4A-244ENST00000460060 ANKRD11Q6UB99 2663 aaPredicted RBP12.79□□□□□ -0.36
C4A-244ENST00000460060 ASXL3Q9C0F0 2248 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SPEGQ15772 3267 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 IGHV1OR15-9A0A0B4J2B8 117 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 ANKRD66B4E2M5 251 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SYNCRIPO60506 623 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 CTSLP07711 333 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 GRIA4P48058 902 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 EPHB1P54762 984 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 CAMK2GQ13555 558 aaPredicted RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 STARD3Q14849 445 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 FASTKD3Q14CZ7 662 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 KYNUQ16719 465 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 QPCTQ16769 361 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PCID2Q5JVF3 399 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 ARMC3Q5W041 872 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 DENND2CQ68D51 928 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 CASC4Q6P4E1 433 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PROSER1Q86XN7 944 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 CCNJLQ8IV13 435 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SLC41A1Q8IVJ1 513 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PALM2Q8IXS6 379 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 MPP5Q8N3R9 675 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 MREGQ8N565 214 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PYROXD1Q8WU10 500 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PIH1D2Q8WWB5 315 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 C9orf72Q96LT7 481 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 TTC25Q96NG3 672 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 KLHL32Q96NJ5 620 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SRPK1Q96SB4 655 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 GABRG3Q99928 467 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 SYBUQ9NX95 663 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 NINJ2Q9NZG7 142 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 DKK3Q9UBP4 350 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 PHTF1Q9UMS5 762 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 CHMP2BQ9UQN3 213 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 MAD1L1Q9Y6D9 718 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 TEX264Q9Y6I9 313 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 GOLGA4Q13439 2230 aaKnown RBP12.78□□□□□ -0.36
C4A-244ENST00000460060 CABIN1Q9Y6J0 2220 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 DMXL2Q8TDJ6 3036 aa12.78□□□□□ -0.36
C4A-244ENST00000460060 URB1O60287 2271 aaKnown RBP12.77□□□□□ -0.36
C4A-244ENST00000460060 ASPMQ8IZT6 3477 aa12.77□□□□□ -0.36
C4A-244ENST00000460060 A0A1W2PQF6 199 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 TSPAN11A1L157 253 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 RNASEH1O60930 286 aaKnown RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 ZNF217O75362 1048 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 IL1BP01584 269 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 SYPP08247 313 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 HOXB2P14652 356 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 TSHRP16473 764 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 PGAM1P18669 254 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 ADRA1DP25100 572 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 SLC8A1P32418 973 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 CRADDP78560 199 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 SLC14A1Q13336 389 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 LAMB3Q13751 1172 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 POU6F1Q14863 301 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 ZNF805Q5CZA5 627 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 FAM46CQ5VWP2 391 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 BRAT1Q6PJG6 821 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 ZSWIM9Q86XI8 627 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 IGDCC3Q8IVU1 814 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 PPHLN1Q8NEY8 458 aaKnown RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 BLOC1S5Q8TDH9 187 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 RANBP9Q96S59 729 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 WDR83Q9BRX9 315 aaKnown RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 PABPC3Q9H361 631 aaKnown RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 CD248Q9HCU0 757 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 ZC3H7BQ9UGR2 993 aaKnown RBP12.77□□□□□ -0.37
C4A-244ENST00000460060 APC2O95996 2303 aa12.77□□□□□ -0.37
C4A-244ENST00000460060 DSPP15924 2871 aaKnown RBP12.76□□□□□ -0.37
C4A-244ENST00000460060 KNTC1P50748 2209 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 HEATR9A2RTY3 570 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 C1QTNF3-AMACRE9PGA6 284 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 KPNA3O00505 521 aaPredicted RBP12.76□□□□□ -0.37
C4A-244ENST00000460060 SH3BP5O60239 455 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 TTC4O95801 387 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 TRBC1P01850 177 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 TIMP2P16035 220 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 CTPS1P17812 591 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 HNF1BP35680 557 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 HSD17B3P37058 310 aa12.76□□□□□ -0.37
C4A-244ENST00000460060 ABL2P42684 1182 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms