RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LPCAT4Q643R3 524 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 KDELC2Q7Z4H8 507 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ARMC8Q8IUR7 673 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 RBM15BQ8NDT2 890 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 REXO5Q96IC2 774 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 CLPTM1LQ96KA5 538 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 VPS35Q96QK1 796 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 NODALQ96S42 347 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 RUSC1Q9BVN2 902 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 DSN1Q9H410 356 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 EXD2Q9NVH0 621 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 TAS2R7Q9NYW3 318 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 DNPEPQ9ULA0 475 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ILVBLA1L0T0 632 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 PGRP06401 933 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 IDH2P48735 452 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 KPNA1P52294 538 aaPredicted RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 UGT2B15P54855 530 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 OR52L1Q8NGH7 329 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 PNMA5Q96PV4 448 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ETNK2Q9NVF9 386 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 BARX2Q9UMQ3 279 aaPredicted RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 CLCA2Q9UQC9 943 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 FAM172BPA6NC97 362 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 M0QYT0 321 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 DDX3YO15523 660 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 HOXA2O43364 376 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 AKAP8O43823 692 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 SEC22BO75396 215 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 F2P00734 622 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 VTNP04004 478 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 F8A1P23610 371 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 SSTR3P32745 418 aaPredicted RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 MRPS6P82932 125 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 PITPNAQ00169 270 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 FGD3Q5JSP0 725 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 HYIQ5T013 277 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 KLHL24Q6TFL4 600 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 DNAAF5Q86Y56 855 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 UNC5BQ8IZJ1 945 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 PRELID2Q8N945 189 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 C9orf43Q8TAL5 461 aaPredicted RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 TRAPPC12Q8WVT3 735 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 TPD52L3Q96J77 140 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 CDK5RAP2Q96SN8 1893 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 DHX15O43143 795 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 NRP2O60462 931 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 METTL18O95568 372 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 C8BP07358 591 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 SLC9A3P48764 834 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 TAF6P49848 677 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ACTR3P61158 418 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 CAMK2GQ13555 558 aaPredicted RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 SPATS1Q496A3 300 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 FAM220AQ7Z4H9 259 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ZZZ3Q8IYH5 903 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 SPIRE2Q8WWL2 714 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 UNKQ9C0B0 810 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 DNAJC11Q9NVH1 559 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
UFD1-205ENST00000459854 PCDHA2Q9Y5H9 948 aa9.76□□□□□ -0.85
UFD1-205ENST00000459854 ATAD5Q96QE3 1844 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 NDUFS2O75306 463 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 RPLP0P05388 317 aaKnown RBP9.75□□□□□ -0.85
UFD1-205ENST00000459854 AXLP30530 894 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
UFD1-205ENST00000459854 UBAP2LQ14157 1087 aaKnown RBP9.75□□□□□ -0.85
UFD1-205ENST00000459854 ZNF423Q2M1K9 1284 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 PLEKHG6Q3KR16 790 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 PCID2Q5JVF3 399 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 CBWD2Q8IUF1 395 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 CLYBLQ8N0X4 340 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 FBXO30Q8TB52 745 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 C15orf40Q8WUR7 153 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 SLC47A1Q96FL8 570 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ACOX2Q99424 681 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 IGSF9Q9P2J2 1179 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 PDE10AQ9Y233 779 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 A0A0B4J269 797 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 A0A1W2PQ45 241 aaPredicted RBP9.75□□□□□ -0.85
UFD1-205ENST00000459854 A0A1W2PQY0 241 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ISPDA4D126 451 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 PRR5-ARHGAP8B1AHC4 643 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 TCEA3O75764 348 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 GSTT2BP0CG30 244 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 MGAT1P26572 445 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ARHGAP8P85298 464 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 MAPKAPK3Q16644 382 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 PPM1LQ5SGD2 360 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 SHQ1Q6PI26 577 aaKnown RBP9.75□□□□□ -0.85
UFD1-205ENST00000459854 MFSD7Q6UXD7 560 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ZCCHC23Q6ZST2 131 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ADCK2Q7Z695 626 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 SLC47A2Q86VL8 602 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 ANKRD52Q8NB46 1076 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 B3GALNT2Q8NCR0 500 aa9.75□□□□□ -0.85
UFD1-205ENST00000459854 KIAA0895Q8NCT3 520 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms