RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 TIMP2P16035 220 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 OAS2P29728 719 aaKnown RBP11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ALDH4A1P30038 563 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 OR1D5P58170 312 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RNASE9P60153 205 aaKnown RBP11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SPA17Q15506 151 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SLC25A52Q3SY17 297 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SLC45A3Q96JT2 553 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZYG11BQ9C0D3 744 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TMEM168Q9H0V1 697 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TP53TG5Q9Y2B4 290 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PCDHA13Q9Y5I0 950 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DGKBQ9Y6T7 804 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CREBBPQ92793 2442 aa11.32□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CHD5Q8TDI0 1954 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FAM170AA1A519 330 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TMEM202A6NGA9 273 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 K7EM74 188 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 KRT3P12035 628 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MAN1A1P33908 653 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FLT3P36888 993 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ARHGAP25P42331 645 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 KLRB1Q12918 225 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DEFB109BQ30KR1 87 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TMEM52BQ4KMG9 183 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TRNP1Q6NT89 227 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 STRADAQ7RTN6 431 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 UNC5BQ8IZJ1 945 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PLA2G15Q8NCC3 412 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ATL2Q8NHH9 583 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CTNNBL1Q8WYA6 563 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FUBP1Q96AE4 644 aaKnown RBP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DDA1Q9BW61 102 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SYNCQ9H7C4 482 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 GPN2Q9H9Y4 310 aaPredicted RBP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 STAP1Q9ULZ2 295 aa11.31□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LOC101059948A0A1B0GTJ6 334 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 A1L4Q6 167 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 HAX1O00165 279 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TMCC1O94876 653 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CCDC175P0C221 793 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MPSTP25325 297 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CD1CP29017 333 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CSF2RBP32927 897 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RFC1P35251 1148 aaPredicted RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 AIF1P55008 147 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MTM1Q13496 603 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ANKS6Q68DC2 871 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ZNF438Q7Z4V0 828 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 FAM131BQ86XD5 332 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RNF10Q8N5U6 811 aaKnown RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 AGBL5Q8NDL9 886 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 OR56A4Q8NGH8 313 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 APOBEC4Q8WW27 367 aaKnown RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PACSIN1Q9BY11 444 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TSGA10Q9BZW7 698 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SPATS2LQ9NUQ6 558 aaKnown RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 OCIAD1Q9NX40 245 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 SLC39A1Q9NY26 324 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 TMEM9Q9P0T7 183 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DKK3Q9UBP4 350 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CNOT8Q9UFF9 292 aaKnown RBP11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PILRAQ9UKJ1 303 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 DOCK4Q8N1I0 1966 aa11.3□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CXorf51AA0A1B0GTR3 108 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 RHPN2P1A8MT19 583 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 CAPN5O15484 640 aaPredicted RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 INSIG1O15503 277 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PIGNO95427 931 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 F9P00740 461 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PRKCGP05129 697 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 THRAP10827 490 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 GNLYP22749 145 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 XPAP23025 273 aaPredicted RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PCK1P35558 622 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ETFBP38117 255 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 MAGEA1P43355 309 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 LIMK2P53671 638 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 GEMIN4P57678 1058 aaKnown RBP11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 KIAA1024LP59773 190 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 ELP6Q0PNE2 266 aa11.29□□□□□ -0.6
PRAMEF35P-201ENST00000458709 PIGHQ14442 188 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms