RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TSR1Q2NL82 804 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 RALGPS1Q5JS13 557 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 RAET1GQ6H3X3 334 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 HEATR4Q86WZ0 1026 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 JAMLQ86YT9 394 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 NDUFAF2Q8N183 169 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 Q8N9G6 341 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 KCTD6Q8NC69 237 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CTNNBL1Q8WYA6 563 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CCDC97Q96F63 343 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 COQ10AQ96MF6 247 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CCNL2Q96S94 520 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 LGR4Q9BXB1 951 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 STRADBQ9C0K7 418 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 TMEM168Q9H0V1 697 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 DPEP2Q9H4A9 486 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 CARS2Q9HA77 564 aaKnown RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 HAUS2Q9NVX0 235 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 KCTD5Q9NXV2 234 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 RCOR3Q9P2K3 495 aaPredicted RBP15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 RABGEF1Q9UJ41 708 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 FLNCQ14315 2725 aa15.75■□□□□ 0.11
CHCHD3-204ENST00000457942 PRSS38A1L453 326 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 NPIPB15A6NHN6 443 aaPredicted RBP15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 CDRT15L2A8MXV6 281 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 D6RAR5 112 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 TNFRSF10CO14798 259 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 PGLSO95336 258 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 MAP3K6O95382 1288 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 HOXC4P09017 264 aaPredicted RBP15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 CD48P09326 243 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 GM2AP17900 193 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 PDX1P52945 283 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 EPHB1P54762 984 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 CCL7P80098 99 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 BIRC2Q13490 618 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 TGIF1Q15583 401 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 LINC00303Q3SY05 128 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 CCNJLQ8IV13 435 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 PELI3Q8N2H9 469 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 DTD2Q96FN9 168 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 SEMA3CQ99985 751 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 FOXP3Q9BZS1 431 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 POLR1EQ9GZS1 481 aaKnown RBP15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 LRRN3Q9H3W5 708 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 DEF6Q9H4E7 631 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 SSUH2Q9Y2M2 353 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 PCDHGA8Q9Y5G5 932 aa15.74■□□□□ 0.11
CHCHD3-204ENST00000457942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.74■□□□□ 0.112e-6■■■□□ 15.7
CHCHD3-204ENST00000457942 ARHGEF17Q96PE2 2063 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 TERTO14746 1132 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 EFSO43281 561 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 LHCGRP22888 699 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 TRIM23P36406 574 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 GARSP41250 739 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 GNPDA1P46926 289 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 INHBCP55103 352 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 ILF3Q12906 894 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 DPYSL3Q14195 570 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 C14orf28Q4W4Y0 310 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 SPECC1LQ69YQ0 1117 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 TIGD7Q6NT04 549 aaPredicted RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 DOK6Q6PKX4 331 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 IGF2-ASQ6U949 168 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 USP53Q70EK8 1073 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 HSD11B1LQ7Z5J1 315 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 B3GNT8Q7Z7M8 397 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 TSPAN33Q86UF1 283 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 LRRC49Q8IUZ0 686 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 MAP7D3Q8IWC1 876 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 FBXO39Q8N4B4 442 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 CCL4L1Q8NHW4 92 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 KIAA1524Q8TCG1 905 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 XPO4Q9C0E2 1151 aaKnown RBP15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 CD84Q9UIB8 345 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 UNC13CQ8NB66 2214 aa15.73■□□□□ 0.11
CHCHD3-204ENST00000457942 BSNQ9UPA5 3926 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 TMX2-CTNND1H3BSU7 103 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 PSMD11O00231 422 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 NTN3O00634 580 aaPredicted RBP15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 H2AFZP0C0S5 128 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 HGFP14210 728 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 GLB1P16278 677 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 CA4P22748 312 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 GPR1P46091 355 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 CDK3Q00526 305 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 PTPRRQ15256 657 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ATP13A4Q4VNC1 1196 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ANKRD20A8PQ5CZ79 823 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 CERCAMQ5T4B2 595 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 NCBP2-AS2Q69YL0 99 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 ATG14Q6ZNE5 492 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 Q6ZVL8 140 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 H2AFVQ71UI9 128 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 RAB11FIP2Q7L804 512 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 VASH2Q86V25 355 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 GPR156Q8NFN8 814 aa15.72■□□□□ 0.11
CHCHD3-204ENST00000457942 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms