RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CYP4Z2PQ8N1L4 340 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 NIPA2Q8N8Q9 360 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 GOLM1Q8NBJ4 401 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 CNIH3Q8TBE1 160 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 RDH11Q8TC12 318 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 ROGDIQ9GZN7 287 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 LINC00597Q9H2U6 94 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 CDCP1Q9H5V8 836 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 XPR1Q9UBH6 696 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 PRPF19Q9UMS4 504 aaKnown RBP4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 PCDHB4Q9Y5E5 795 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 USP3Q9Y6I4 520 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 U3KQV3 271 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 CACNA1BQ00975 2339 aa4.55□□□□□ -1.68
DEPDC1-202ENST00000456315 TMEM114B3SHH9 223 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 H7C0C1 242 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 NOBOXO60393 691 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PGLSO95336 258 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TP53P04637 393 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 IL1R1P14778 569 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 GAP43P17677 238 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TNNI1P19237 187 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CD40LGP29965 261 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PTPN7P35236 360 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 BAG6P46379 1132 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 RGS7P49802 495 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CRYBA2P53672 197 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 HSDL1Q3SXM5 330 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM205BPQ63HN1 556 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 FAAH2Q6GMR7 532 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PAMR1Q6UXH9 720 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 OTOP2Q7RTS6 562 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 WDR53Q7Z5U6 358 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SPRED1Q7Z699 444 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 EXOC8Q8IYI6 725 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 OR5H6Q8NGV6 325 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 DNAJB14Q8TBM8 379 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 WDR66Q8TBY9 1149 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 URGCPQ8TCY9 931 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 OSCP1Q8WVF1 389 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PRRG3Q9BZD7 231 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ABCB10Q9NRK6 738 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 C14orf119Q9NWQ9 140 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ABI2Q9NYB9 513 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC2A6Q9UGQ3 507 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 AURKCQ9UQB9 309 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 NAALAD2Q9Y3Q0 740 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TESMINQ9Y4I5 508 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SNAP91O60641 907 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 MSCO60682 206 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TRIM13O60858 407 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CNTN5O94779 1100 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SLC10A3P09131 477 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CHRNA4P43681 627 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PPP2R2BQ00005 443 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PLIN5Q00G26 463 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SURF1Q15526 300 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 AOC3Q16853 763 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SOWAHAQ2M3V2 549 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 BRMS1LQ5PSV4 323 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 STEAP4Q687X5 459 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SCIMPQ6UWF3 145 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 STXBP4Q6ZWJ1 553 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 METTL4Q8N3J2 472 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ANKFN1Q8N957 763 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TRPV3Q8NET8 790 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 STYXQ8WUJ0 223 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ANKRD36BP1Q96IX9 119 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SEPHS2Q99611 448 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PRDM12Q9H4Q4 367 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TDRD3Q9H7E2 651 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 GPN2Q9H9Y4 310 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 ADPRHL2Q9NX46 363 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SIRT5Q9NXA8 310 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SNTG2Q9NY99 539 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 RGS17Q9UGC6 210 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 IKZF3Q9UKT9 509 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CNOT11Q9UKZ1 510 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PRMT5O14744 637 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 RFPL2O75678 378 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 DDHD2O94830 711 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 FARP2O94887 1054 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 S100BP04271 92 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 PAMP19021 973 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SAT1P21673 171 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 GPX3P22352 226 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 RFX1P22670 979 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 STAT2P52630 851 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 OSTNP61366 133 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 SNRPD2P62316 118 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 FAM189BP81408 668 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 HIST2H2ACQ16777 129 aaPredicted RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 CRTC3Q6UUV7 619 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 GLCCI1Q86VQ1 547 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 DDIASQ8IXT1 998 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 DTWD1Q8N5C7 304 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 TDRD5Q8NAT2 981 aaKnown RBP4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 C7orf57Q8NEG2 295 aa4.54□□□□□ -1.68
DEPDC1-202ENST00000456315 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms