RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 TTLL3Q9Y4R7 772 aa12.95□□□□□ -0.34
TREX1-203ENST00000456089 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 B4DGG1 531 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 APOL1O14791 398 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 TCEA3O75764 348 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 MAP3K6O95382 1288 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 LCA5LO95447 670 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 KRT10P13645 584 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 COMTP21964 271 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 TMPRSS3P57727 454 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 GALNT2Q10471 571 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 AGERQ15109 404 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 TCEAL1Q15170 157 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 NDUFAF2Q8N183 169 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 OR56A4Q8NGH8 313 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 WDR36Q8NI36 951 aaKnown RBP12.94□□□□□ -0.34
TREX1-203ENST00000456089 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
TREX1-203ENST00000456089 RNF157Q96PX1 679 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 SMIM14Q96QK8 99 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 GFM1Q96RP9 751 aaKnown RBP12.94□□□□□ -0.34
TREX1-203ENST00000456089 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 RBM15Q96T37 977 aaKnown RBP eCLIP12.94□□□□□ -0.34
TREX1-203ENST00000456089 MGME1Q9BQP7 344 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 POLR1EQ9GZS1 481 aaKnown RBP12.94□□□□□ -0.34
TREX1-203ENST00000456089 CYP4F12Q9HCS2 524 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
TREX1-203ENST00000456089 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
TREX1-203ENST00000456089 EPN1Q9Y6I3 576 aaPredicted RBP12.94□□□□□ -0.34
TREX1-203ENST00000456089 CFAP46Q8IYW2 2715 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CCDC187A0A096LP49 1063 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 SOWAHDA6NJG2 315 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CDRT15L2A8MXV6 281 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 D6RAR5 112 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CACNB4O00305 520 aaPredicted RBP12.93□□□□□ -0.34
TREX1-203ENST00000456089 MATN3O15232 486 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 SOCS5O75159 536 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 NDUFA10O95299 355 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 PEX11BO96011 259 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CA4P22748 312 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CES1P23141 567 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CCNCP24863 283 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 KIAA1024LP59773 190 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 C19orf57Q0VDD7 668 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 TRAF2Q12933 501 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CNGA3Q16281 694 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 TAF1BQ53T94 588 aaPredicted RBP12.93□□□□□ -0.34
TREX1-203ENST00000456089 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 LVRNQ6Q4G3 990 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 ZNF843Q8N446 348 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.93□□□□□ -0.34
TREX1-203ENST00000456089 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 GPR156Q8NFN8 814 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
TREX1-203ENST00000456089 FAF2Q96CS3 445 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
TREX1-203ENST00000456089 LRRN3Q9H3W5 708 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 NOD2Q9HC29 1040 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 RBM22Q9NW64 420 aaKnown RBP eCLIP12.93□□□□□ -0.34
TREX1-203ENST00000456089 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 RNF215Q9Y6U7 377 aa12.93□□□□□ -0.34
TREX1-203ENST00000456089 A0A0A6YYK5 440 aaPredicted RBP12.92□□□□□ -0.34
TREX1-203ENST00000456089 GOLGA6CA6NDK9 693 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 GOLGA6BA6NDN3 693 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 PSTPIP1O43586 416 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 NOBOXO60393 691 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 CPP00450 1065 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 FUCA1P04066 466 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 GOLGA6DP0CG33 693 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 CYP2A6P11509 494 aaPredicted RBP12.92□□□□□ -0.34
TREX1-203ENST00000456089 CCNB1P14635 433 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 CTPS1P17812 591 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 LHCGRP22888 699 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 ETV3P41162 512 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 POLD2P49005 469 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 HADHBP55084 474 aaKnown RBP12.92□□□□□ -0.34
TREX1-203ENST00000456089 DYNLT1P63172 113 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 SKOR1P84550 965 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 GBE1Q04446 702 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 AP1B1Q10567 949 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
TREX1-203ENST00000456089 LY6DQ14210 128 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 ARMC12Q5T9G4 340 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 IGF2-ASQ6U949 168 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 RFLNAQ6ZTI6 216 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
TREX1-203ENST00000456089 TMPRSS9Q7Z410 1059 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 HSD11B1LQ7Z5J1 315 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 DAAM2Q86T65 1068 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 KIAA1328Q86T90 577 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 TSPAN33Q86UF1 283 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 JAMLQ86YT9 394 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
TREX1-203ENST00000456089 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms