RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 COPS7BQ9H9Q2 264 aaPredicted RBP12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 SYTL2Q9HCH5 934 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 AP4S1Q9Y587 144 aa12.52□□□□□ -0.41
ECHDC1-209ENST00000454591 DYTNA2CJ06 578 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 CCDC162PA2VCL2 907 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 LCHNA4D1U4 455 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 ENO4A6NNW6 628 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 STX16-NPEPL1H3BU86 382 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 STX16O14662 325 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 KERAO60938 352 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 SERPINF2P08697 491 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PRR35P0CG20 571 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 HSD17B1P14061 328 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 TACR2P21452 398 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 HOXD9P28356 352 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PMLP29590 882 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 GSTT1P30711 240 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 GPR15P49685 360 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 ZNF140P52738 457 aaPredicted RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 STX1BP61266 288 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PABPC1LQ4VXU2 614 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 C6orf10Q5SRN2 563 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PAOXQ6QHF9 649 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 KDELC2Q7Z4H8 507 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 FUNDC1Q8IVP5 155 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 BBS5Q8N3I7 341 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 OR4L1Q8NH43 312 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 DDI1Q8WTU0 396 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 LPGAT1Q92604 370 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 TMA16Q96EY4 203 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 DNAJC1Q96KC8 554 aaKnown RBP12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 EFHD1Q9BUP0 239 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 MUC13Q9H3R2 512 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 CATSPERZQ9NTU4 200 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
ECHDC1-209ENST00000454591 MTMR11A4FU01 709 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PRORSD1PA6NEY8 169 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 AQP12BA6NM10 295 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 AZIN1O14977 448 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 MUSKO15146 869 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SUPT7LO94864 414 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 TFAP2AP05549 437 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 RPS17P08708 135 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 ALDOCP09972 364 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CKBP12277 381 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CR2P20023 1033 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 GRK4P32298 578 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SH3BP2P78314 561 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 BNIP2Q12982 314 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 ZNF235Q14590 738 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 GPR162Q16538 588 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PPP1R3AQ16821 1122 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CTXN3Q4LDR2 81 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 THEMIS2Q5TEJ8 643 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 AFTPHQ6ULP2 937 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 EFL1Q7Z2Z2 1120 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SPATA24Q86W54 205 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 AQP12AQ8IXF9 295 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CHCHD4Q8N4Q1 142 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PACRGLQ8N7B6 248 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 ANKFN1Q8N957 763 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SLC43A3Q8NBI5 491 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 NAT14Q8WUY8 206 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PBXIP1Q96AQ6 731 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PHF21BQ96EK2 531 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 CDKN2AIPNLQ96HQ2 116 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 RPRD1AQ96P16 312 aaPredicted RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 UNKQ9C0B0 810 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SLC52A3Q9NQ40 469 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SDR39U1Q9NRG7 319 aaPredicted RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 UBAP1Q9NZ09 502 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 ADA2Q9NZK5 511 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SEPT3Q9UH03 358 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 KCTD3Q9Y597 815 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 DNAJC15Q9Y5T4 150 aa12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 OAS3Q9Y6K5 1087 aaKnown RBP12.5□□□□□ -0.41
ECHDC1-209ENST00000454591 SLC12A8A0AV02 714 aa12.49□□□□□ -0.41
ECHDC1-209ENST00000454591 GRXCR2A6NFK2 248 aa12.49□□□□□ -0.41
ECHDC1-209ENST00000454591 HAX1O00165 279 aa12.49□□□□□ -0.41
ECHDC1-209ENST00000454591 VNN2O95498 520 aa12.49□□□□□ -0.41
ECHDC1-209ENST00000454591 BMP2P12643 396 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms