RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ABCG8Q9H221 673 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 WDR26Q9H7D7 661 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 DNAJC28Q9NX36 388 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 TOR4AQ9NXH8 423 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 UBP1Q9NZI7 540 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 ZNF711Q9Y462 761 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 OR1A2Q9Y585 309 aa14.15□□□□□ -0.14
HDAC4-205ENST00000454542 C1orf232A0A0U1RR37 186 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 MED19A0JLT2 244 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 H3BM21 787 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 SDC3O75056 442 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 STK10O94804 968 aaKnown RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 CLDN7O95471 211 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 MYCLP1P12525 358 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 SPINT3P49223 89 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 GEMP55040 296 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 ALG11Q2TAA5 492 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 KCTD16Q68DU8 428 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 DRICH1Q6PGQ1 229 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 ADAMTSL4Q6UY14 1074 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 LYSMD3Q7Z3D4 306 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 PHACTR4Q8IZ21 702 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 PDXPQ96GD0 296 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 WDR92Q96MX6 357 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 PPP1R2P1Q96PQ5 205 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 SRPK1Q96SB4 655 aaKnown RBP14.14□□□□□ -0.15
HDAC4-205ENST00000454542 CDC6Q99741 560 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 LRRC61Q9BV99 259 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 UCKL1Q9NWZ5 548 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 ZKSCAN5Q9Y2L8 839 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 JRKLQ9Y4A0 524 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 SPO11Q9Y5K1 396 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 CSNK1G3Q9Y6M4 447 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 DGKBQ9Y6T7 804 aa14.14□□□□□ -0.15
HDAC4-205ENST00000454542 MYLKQ15746 1914 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 F5H423 210 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 CACNB4O00305 520 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TNFRSF10CO14798 259 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 GCATO75600 419 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 ANXA9O76027 345 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 FGF1P05230 155 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 PYGLP06737 847 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 PMLP29590 882 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 CHRNA4P43681 627 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 CDK3Q00526 305 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TRIP6Q15654 476 aaKnown RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 SLC1A5Q15758 541 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 P3H1Q32P28 736 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 PROX2Q3B8N5 592 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 ZNF542PQ5EBM4 170 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 SIRPB2Q5JXA9 342 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 N4BP2L1Q5TBK1 243 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 DENND2CQ68D51 928 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 KCTD11Q693B1 232 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 NYAP1Q6ZVC0 841 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TMC3Q7Z5M5 1100 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 HEATR4Q86WZ0 1026 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 RBFAQ8N0V3 343 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 RASGEF1CQ8N431 466 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TTC30BQ8N4P2 665 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 IPMKQ8NFU5 416 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 ATL2Q8NHH9 583 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 RHBDD1Q8TEB9 315 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 SETD7Q8WTS6 366 aaKnown RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 BTN2A2Q8WVV5 523 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 COX14Q96I36 57 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TMEM121Q9BTD3 319 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 LGR4Q9BXB1 951 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 FRMD8Q9BZ67 464 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TCEAL2Q9H3H9 227 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 TRABDQ9H4I3 376 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 ZFYVE1Q9HBF4 777 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 FGF22Q9HCT0 170 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 PKD2L2Q9NZM6 624 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 APOBEC3BQ9UH17 382 aaKnown RBP14.13□□□□□ -0.15
HDAC4-205ENST00000454542 WASF3Q9UPY6 502 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 SPEGQ15772 3267 aa14.13□□□□□ -0.15
HDAC4-205ENST00000454542 SPAARA0A1B0GVQ0 90 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 TMEM202A6NGA9 273 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 USP27XA6NNY8 438 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 PIRTP0C851 137 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 JUNDP17535 347 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 HTR1BP28222 390 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 HK3P52790 923 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 FOXK2Q01167 660 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 RAET1GQ6H3X3 334 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 RANBP10Q6VN20 620 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 SLC35F6Q8N357 371 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 OR56A4Q8NGH8 313 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 OR1E3Q8WZA6 343 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 SCAMP4Q969E2 229 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 AP2M1Q96CW1 435 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 AGAP2Q99490 1192 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 CDH19Q9H159 772 aa14.12□□□□□ -0.15
HDAC4-205ENST00000454542 PHPT1Q9NRX4 125 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms