RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 MRPL40Q9NQ50 206 aaKnown RBP10.67□□□□□ -0.7
DDX39A-203ENST00000454233 HYOU1Q9Y4L1 999 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 PCDHB1Q9Y5F3 818 aa10.67□□□□□ -0.7
DDX39A-203ENST00000454233 ASXL3Q9C0F0 2248 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 PKD1L2Q7Z442 2459 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 RRP8O43159 456 aaKnown RBP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 PSTPIP1O43586 416 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 BRINP1O60477 761 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 IPO7O95373 1038 aaKnown RBP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 CD86P42081 329 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 HADHBP55084 474 aaKnown RBP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 DYNLT1P63172 113 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 CDK3Q00526 305 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 DPTQ07507 201 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 SPIDRQ14159 915 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 PTPRRQ15256 657 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ISXQ2M1V0 245 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 KCTD16Q68DU8 428 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 MFSD7Q6UXD7 560 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 NPNTQ6UXI9 565 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 LRRC69Q6ZNQ3 347 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ZNF765Q7L2R6 523 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 TECPR1Q7Z6L1 1165 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 NRSN1Q8IZ57 195 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 LSMEM2Q8N112 164 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 KIAA1524Q8TCG1 905 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 HNRNPLLQ8WVV9 542 aaKnown RBP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ADGRE3Q9BY15 652 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 GSDMCQ9BYG8 508 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 TMEM168Q9H0V1 697 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ABCG8Q9H221 673 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 DPEP2Q9H4A9 486 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 SUDS3Q9H7L9 328 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 SEPT10Q9P0V9 454 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 CD84Q9UIB8 345 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
DDX39A-203ENST00000454233 PCDHA13Q9Y5I0 950 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 LRP4O75096 1905 aa10.66□□□□□ -0.7
DDX39A-203ENST00000454233 A0A087WV48 116 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 A0A0A6YYK5 440 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 A0A0U1RQS6 177 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 C1orf232A0A0U1RR37 186 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 B4DGG1 531 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 LCA5LO95447 670 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 PRLP01236 227 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 MPOP05164 745 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 CEACAM5P06731 702 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 ABCG1P45844 678 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 GNPDA1P46926 289 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 LSSP48449 732 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 NR2C2P49116 596 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 ZNF75DP51815 510 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 STC1P52823 247 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 GABREP78334 506 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 SKOR1P84550 965 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 PTSQ03393 145 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 ZBTB17Q13105 803 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 PEX6Q13608 980 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 IHHQ14623 411 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 COL28A1Q2UY09 1125 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 TBC1D25Q3MII6 688 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 OGFOD3Q6PK18 319 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 ADAMTSL4Q6UY14 1074 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 NT5DC3Q86UY8 548 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 NLRP8Q86W28 1048 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 RAVER1Q8IY67 606 aaKnown RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 CNTD1Q8N815 330 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 GPR156Q8NFN8 814 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 SNIP1Q8TAD8 396 aaKnown RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 CCHCR1Q8TD31 782 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 FGF11Q92914 225 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 CCDC74AQ96AQ1 378 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 MRFAP1L1Q96HT8 127 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 AGAP3Q96P47 875 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 OLFM3Q96PB7 478 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 SMIM14Q96QK8 99 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 PANX2Q96RD6 677 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 GFM1Q96RP9 751 aaKnown RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 LYSMD1Q96S90 227 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 MLPHQ9BV36 600 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 FRMD8Q9BZ67 464 aaPredicted RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 POLR1BQ9H9Y6 1135 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 TRNAU1APQ9NX07 287 aaKnown RBP10.65□□□□□ -0.7
DDX39A-203ENST00000454233 SUFUQ9UMX1 484 aa10.65□□□□□ -0.7
DDX39A-203ENST00000454233 FAM208BQ5VWN6 2430 aa10.65□□□□□ -0.71
DDX39A-203ENST00000454233 RP1P56715 2156 aa10.65□□□□□ -0.71
DDX39A-203ENST00000454233 SPEGQ15772 3267 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ANKRD66B4E2M5 251 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 TLX3O43711 291 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CST8O60676 142 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 ZRANB2O95218 330 aaKnown RBP eCLIP10.64□□□□□ -0.713e-7■■■■□ 25.7
DDX39A-203ENST00000454233 CLDN7O95471 211 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 IVLP07476 585 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 MMP2P08253 660 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 GLB1P16278 677 aa10.64□□□□□ -0.71
DDX39A-203ENST00000454233 EIF2S3P41091 472 aaKnown RBP10.64□□□□□ -0.71
DDX39A-203ENST00000454233 CDKN2BP42772 138 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms