RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 APOC2P02655 101 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 PCCBP05166 539 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 ELFN1P0C7U0 828 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 CTSEP14091 401 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 SERPINB6P35237 376 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 RPIAP49247 311 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 SLC10A7Q0GE19 358 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 INPP5AQ14642 412 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 RTP5Q14D33 572 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 LLGL1Q15334 1064 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 ENPP7Q6UWV6 458 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 RD3Q7Z3Z2 195 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 ATPAF2Q8N5M1 289 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 NOA1Q8NC60 698 aaKnown RBP18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 ATL2Q8NHH9 583 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 PCDH19Q8TAB3 1148 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 DEPDC7Q96QD5 511 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 APOOQ9BUR5 198 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 LRRC61Q9BV99 259 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 SCUBE2Q9NQ36 999 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 U3KQA8 63 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 CELSR3Q9NYQ7 3312 aa18.06■□□□□ 0.48
SQSTM1-204ENST00000453046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 GCATO75600 419 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 TSHRP16473 764 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 HSPA9P38646 679 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 ADCY2Q08462 1091 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 NR0B2Q15466 257 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 TEX35Q5T0J7 233 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 CCDC70Q6NSX1 233 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 DRICH1Q6PGQ1 229 aaPredicted RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 EFL1Q7Z2Z2 1120 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 HID1Q8IV36 788 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 PQLC3Q8N755 202 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 PDCD6IPQ8WUM4 868 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 SCG3Q8WXD2 468 aaKnown RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 ECHDC3Q96DC8 303 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 TBATAQ96M53 351 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 PNMA8BQ9ULN7 279 aaPredicted RBP18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 OR1A2Q9Y585 309 aa18.05■□□□□ 0.48
SQSTM1-204ENST00000453046 TTC24A2A3L6 582 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 EME2A4GXA9 379 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 CFAP69A5D8W1 941 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 A8MX80 341 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 LMO7DNF2Z398 122 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 TRAFD1O14545 582 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 RECQL5O94762 991 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 RASGRP1O95267 797 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 ALPIP09923 528 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 NFKBIAP25963 317 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 HK3P52790 923 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 TERF1P54274 439 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 MTM1Q13496 603 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 NFATC4Q14934 902 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 AGERQ15109 404 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 ELOCQ15369 112 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 CCNG2Q16589 344 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 C6orf132Q5T0Z8 1188 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 C8orf74Q6P047 294 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 GUSBP11Q6P575 273 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 LRRC69Q6ZNQ3 347 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 FSTL5Q8N475 847 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 PLD5Q8N7P1 536 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 TSACCQ96A04 125 aaPredicted RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 MAGOHBQ96A72 148 aaKnown RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 DDX47Q9H0S4 455 aaKnown RBP18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 KLQ9UEF7 1012 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 PCDHB1Q9Y5F3 818 aa18.04■□□□□ 0.48
SQSTM1-204ENST00000453046 A0A087WV48 116 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 A0A1W2PQ67 120 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 YY2O15391 372 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 RRP8O43159 456 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 CTIFO43310 598 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 BRINP1O60477 761 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 MAFKO60675 156 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 ABCG1P45844 678 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 SRP54P61011 504 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 DYNLT1P63172 113 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 ACOX1Q15067 660 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 NOMO1Q15155 1222 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 TCEA2Q15560 299 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 ALG11Q2TAA5 492 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 GLE1Q53GS7 698 aaKnown RBP18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 MARC1Q5VT66 337 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 CDCP2Q5VXM1 449 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 NCBP2-AS2Q69YL0 99 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 LIPIQ6XZB0 460 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 DPPA4Q7L190 304 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 PDZD3Q86UT5 571 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 UBXN4Q92575 508 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 WDR92Q96MX6 357 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 NUDCD1Q96RS6 583 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 KRT12Q99456 494 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 BOCQ9BWV1 1114 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 CLPBQ9H078 707 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 GULP1Q9UBP9 304 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 PCYOX1Q9UHG3 505 aa18.03■□□□□ 0.48
SQSTM1-204ENST00000453046 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms