RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 HSPA4LO95757 839 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 LATS1O95835 1130 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 UBTFL1P0CB47 393 aaPredicted RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 NR2F1P10589 423 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 IGFBP2P18065 325 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 MATN1P21941 496 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 GSTM2P28161 218 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 DUSP1P28562 367 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 SLC8A1P32418 973 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 PSMB10P40306 273 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 TUBA4AP68366 448 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 OLR1P78380 273 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 SP3Q02447 781 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CEBPZQ03701 1054 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 VGLL4Q14135 290 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 FRG1Q14331 258 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 IRF3Q14653 427 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CCL15Q16663 113 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 SLC9C1Q4G0N8 1177 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 GXYLT1Q4G148 440 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 RNASE12Q5GAN4 147 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 GPR139Q6DWJ6 353 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 GJB7Q6PEY0 223 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM88Q6PEY1 159 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 NCEH1Q6PIU2 408 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CRELD2Q6UXH1 353 aaPredicted RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF66Q6ZN08 573 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 RRM2BQ7LG56 351 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 KRT74Q7RTS7 529 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 BHLHA9Q7RTU4 235 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CHSY1Q86X52 802 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 VSIG1Q86XK7 387 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 ADGRF3Q8IZF5 1079 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 C12orf76Q8N812 135 aaPredicted RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 TERB1Q8NA31 727 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 PNLDC1Q8NA58 520 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM116Q8NCL8 245 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CADM4Q8NFZ8 388 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 CD99L2Q8TCZ2 262 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 ARHGEF2Q92974 986 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 DAZAP1Q96EP5 407 aaKnown RBP4.53□□□□□ -1.68
LINC00393-202ENST00000452852 KAZALD1Q96I82 304 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 SNX18Q96RF0 628 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 TMEM39BQ9GZU3 492 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 KAT14Q9H8E8 782 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 SCPEP1Q9HB40 452 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 ADAM18Q9Y3Q7 739 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 DOCK1Q14185 1865 aa4.53□□□□□ -1.68
LINC00393-202ENST00000452852 ZNF521Q96K83 1311 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 ZSWIM8A7E2V4 1837 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 DNAJC9-AS1A6NH13 148 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 C16orf96A6NNT2 1141 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 H7C1Q1 480 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 ADAM20O43506 726 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 LIASO43766 372 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 GALTP07902 379 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CHRM4P08173 479 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CETPP11597 493 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 MCCP23508 829 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 TTKP33981 857 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CPOXP36551 454 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 VPS41P49754 854 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 COPB1P53618 953 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CRYMQ14894 314 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 FKBP1CQ5VVH2 108 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 KIAA1614Q5VZ46 1190 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 C17orf99Q6UX52 265 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CHST9Q7L1S5 443 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 SLC46A3Q7Z3Q1 461 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 PRPF39Q86UA1 669 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 ERO1BQ86YB8 467 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 DZIP1Q86YF9 867 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 LAS2Q8IYD9 372 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CCDC105Q8IYK2 499 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 SETD9Q8NE22 299 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 FAM110DQ8TAY7 271 aaPredicted RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 NOC3LQ8WTT2 800 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 FYTTD1Q96QD9 318 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 MAK16Q9BXY0 300 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 API5Q9BZZ5 524 aaKnown RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 CIPCQ9C0C6 399 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 OR10A4Q9H209 315 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 NDST4Q9H3R1 872 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 SNX15Q9NRS6 342 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 UPB1Q9UBR1 384 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 FZD4Q9ULV1 537 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 PTPRFP10586 1907 aa4.52□□□□□ -1.69
LINC00393-202ENST00000452852 RPAP1Q9BWH6 1393 aaPredicted RBP4.52□□□□□ -1.69
LINC00393-202ENST00000452852 MAST2Q6P0Q8 1798 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 UBE2CO00762 179 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PRYO14603 147 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CCNT1O60563 726 aaKnown RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ENTPD3O75355 529 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CIAO1O76071 339 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CBX6O95503 412 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CYP2D6P10635 497 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CDK4P11802 303 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 HOXB9P17482 250 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SFPQP23246 707 aaKnown RBP eCLIP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 MCM3P25205 808 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms