RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 LPCAT1Q8NF37 534 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 UBE2Q2Q8WVN8 375 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 BTN2A2Q8WVV5 523 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 HTR3CQ8WXA8 447 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 HAUS1Q96CS2 278 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 NUS1Q96E22 293 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 OXNAD1Q96HP4 312 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 FCRL5Q96RD9 977 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 VAT1Q99536 393 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 BOCQ9BWV1 1114 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 FGF22Q9HCT0 170 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 CNOT6Q9ULM6 557 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 PACSIN2Q9UNF0 486 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 TTLL3Q9Y4R7 772 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 ASXL3Q9C0F0 2248 aa16.09■□□□□ 0.17
SCAMP4-205ENST00000452128 NEMP2A6NFY4 417 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 YY2O15391 372 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 EPOP01588 193 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 CEACAM5P06731 702 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 TSHRP16473 764 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 NFKBIAP25963 317 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 RBL1P28749 1068 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 OTUD4Q01804 1114 aaKnown RBP16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 CDK18Q07002 472 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 ILKQ13418 452 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 CAMK2BQ13554 666 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 ENPP7Q6UWV6 458 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 ADAMTSL4Q6UY14 1074 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 NDUFAF2Q8N183 169 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 TXLNBQ8N3L3 684 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 CCDC112Q8NEF3 446 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 LMX1AQ8TE12 382 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 SCAMP4Q969E2 229 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 APOLD1Q96LR9 279 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 WDR92Q96MX6 357 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 AGAP2Q99490 1192 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 MLPHQ9BV36 600 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 FRMD8Q9BZ67 464 aaPredicted RBP16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 MAGEE1Q9HCI5 957 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 SEPT10Q9P0V9 454 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 SPASTQ9UBP0 616 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 DMXL2Q8TDJ6 3036 aa16.08■□□□□ 0.16
SCAMP4-205ENST00000452128 TCRBV7S2A1N4TA0A589 114 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 RGSL1A5PLK6 1076 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 H3BM21 787 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 FFAR2O15552 330 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 RASGRP1O95267 797 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 NDST3O95803 873 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 MYF5P13349 255 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 NFKB1P19838 968 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 CA4P22748 312 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 SPINT3P49223 89 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 C1orf61Q13536 156 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 ARHGEF7Q14155 803 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 PRRT3Q5FWE3 981 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 FAXCQ5TGI0 409 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 LVRNQ6Q4G3 990 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 TMC3Q7Z5M5 1100 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 CACTIN-AS1Q8N1I8 211 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 OR56A4Q8NGH8 313 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 PTCD2Q8WV60 388 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 PDXPQ96GD0 296 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 COX14Q96I36 57 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 MRGPRX2Q96LB1 330 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 DUSP23Q9BVJ7 150 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 ADGRE3Q9BY15 652 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 WDR26Q9H7D7 661 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 APOBEC3BQ9UH17 382 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 TRHDEQ9UKU6 1024 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 DNPEPQ9ULA0 475 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 ST14Q9Y5Y6 855 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 PLXNB3Q9ULL4 1909 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 USP24Q9UPU5 2620 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
SCAMP4-205ENST00000452128 ZZEF1O43149 2961 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 TJP3O95049 919 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 CDK4P11802 303 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 MYCLP1P12525 358 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 HTR1BP28222 390 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 EPHB1P54762 984 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 WNT3AP56704 352 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 CDK3Q00526 305 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 MSLNQ13421 630 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 GALNT3Q14435 633 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 DEFB133Q30KQ1 61 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 HENMT1Q5T8I9 393 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 DENND2CQ68D51 928 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 ZCCHC8Q6NZY4 707 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 OGFOD3Q6PK18 319 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 DHRS13Q6UX07 377 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 PID1Q7Z2X4 250 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 HEATR4Q86WZ0 1026 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 MARCH9Q86YJ5 346 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 HID1Q8IV36 788 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms