RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ITKQ08881 620 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 TBX2Q13207 712 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-208ENST00000452047 SPIDRQ14159 915 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 C3orf38Q5JPI3 329 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 LRRC66Q68CR7 880 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 OGFOD3Q6PK18 319 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 RFLNAQ6ZTI6 216 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 VSIG1Q86XK7 387 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 SFTPA2Q8IWL1 248 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 RHOT2Q8IXI1 618 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 LSMEM2Q8N112 164 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CCL4L1Q8NHW4 92 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CCDC74AQ96AQ1 378 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 PRR11Q96HE9 360 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-208ENST00000452047 CYP4F12Q9HCS2 524 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 PHPT1Q9NRX4 125 aaPredicted RBP12.46□□□□□ -0.41
CPSF4-208ENST00000452047 SATB2Q9UPW6 733 aa12.46□□□□□ -0.41
CPSF4-208ENST00000452047 ZFC3H1O60293 1989 aaKnown RBP12.45□□□□□ -0.42
CPSF4-208ENST00000452047 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 A0A1W2PQM1 296 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 LRRD1A4D1F6 860 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 PMS2P1A4D2B8 440 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 D6RAR5 112 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 MMP2P08253 660 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ZNF30P17039 623 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ARHGAP25P42331 645 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ERVPABLB-1P60509 514 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 PTSQ03393 145 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 PPIDQ08752 370 aaKnown RBP12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ARHGEF7Q14155 803 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 TCEAL1Q15170 157 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 TSR1Q2NL82 804 aaKnown RBP12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CERCAMQ5T4B2 595 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 SLC9A4Q6AI14 798 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 LRRC69Q6ZNQ3 347 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 TAF8Q7Z7C8 310 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 NRROSQ86YC3 692 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CNGA4Q8IV77 575 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CCDC13Q8IYE1 715 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.45□□□□□ -0.42
CPSF4-208ENST00000452047 FAM46DQ8NEK8 389 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 OR6C4Q8NGE1 309 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CCDC42Q96M95 316 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 LGMNQ99538 433 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 APPL1Q9UKG1 709 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 CHKBQ9Y259 395 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 SLC17A4Q9Y2C5 497 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 PCDHGA8Q9Y5G5 932 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 ST14Q9Y5Y6 855 aa12.45□□□□□ -0.42
CPSF4-208ENST00000452047 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 KCNK1O00180 336 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 KRT10P13645 584 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 GLB1P16278 677 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 STC1P52823 247 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 PCBP4P57723 403 aaKnown RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 RPL26P61254 145 aaKnown RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 IFI35P80217 286 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SKOR1P84550 965 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 TLE3Q04726 772 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ZBTB17Q13105 803 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 C14orf28Q4W4Y0 310 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SOWAHCQ53LP3 525 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ZFYVE27Q5T4F4 411 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 LRRC38Q5VT99 294 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 RAET1GQ6H3X3 334 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ADAMTSL4Q6UY14 1074 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ZNF765Q7L2R6 523 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 B3GNT8Q7Z7M8 397 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 C17orf82Q86X59 251 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 NDUFAF2Q8N183 169 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 CNTD1Q8N815 330 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 CCNYQ8ND76 341 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ZNF248Q8NDW4 579 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SCAMP4Q969E2 229 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 AP2M1Q96CW1 435 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SCARF2Q96GP6 870 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SLC46A1Q96NT5 459 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 OLFM3Q96PB7 478 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 BBC3Q96PG8 261 aaPredicted RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 LYSMD1Q96S90 227 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 ABCG8Q9H221 673 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 PRORYQ9H606 182 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 CARS2Q9HA77 564 aaKnown RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 PCDH9Q9HC56 1237 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 HAUS2Q9NVX0 235 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 CD84Q9UIB8 345 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 MOSPD1Q9UJG1 213 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 INTUQ9ULD6 942 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 SUFUQ9UMX1 484 aa12.44□□□□□ -0.42
CPSF4-208ENST00000452047 RPL26L1Q9UNX3 145 aaKnown RBP12.44□□□□□ -0.42
CPSF4-208ENST00000452047 BAHCC1Q9P281 2608 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms