RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 TPTEP56180 551 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 BST2Q10589 180 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 SNX17Q15036 470 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 R3HCC1LQ7Z5L2 792 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ITIH5Q86UX2 942 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 PDZD8Q8NEN9 1154 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 KIFC1Q9BW19 673 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ATP13A3Q9H7F0 1226 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 VTA1Q9NP79 307 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 AKT3Q9Y243 479 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ZFC3H1O60293 1989 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TCRBV5S2A0A599 114 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 EEF2KO00418 725 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 UBFD1O14562 309 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 DCLK1O15075 740 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 EIF2S1P05198 315 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 CRHBPP24387 322 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 CDH17Q12864 832 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 POLD3Q15054 466 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 CLPPQ16740 277 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 UGT3A2Q3SY77 523 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 DNAJC14Q6Y2X3 702 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TFAP2DQ7Z6R9 452 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 FBXO16Q8IX29 292 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TBC1D21Q8IYX1 336 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 DEFB106AQ8N104 65 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 NDRG1Q92597 394 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 DGCR6LQ9BY27 220 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 IGSF5Q9NSI5 407 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 KLHL3Q9UH77 587 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ZNF639Q9UID6 485 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ANAPC2Q9UJX6 822 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 WDR90Q96KV7 1748 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 MSI1O43347 362 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 XYLBO75191 536 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TCEA1P23193 301 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 HTR1BP28222 390 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 ADORA2BP29275 332 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 NOS2P35228 1153 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 INAQ16352 499 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 TECRLQ5HYJ1 363 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 LINC00523Q86TU6 105 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 NAT16Q8N8M0 369 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 SMG8Q8ND04 991 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 LRRC58Q96CX6 371 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 SLC30A3Q99726 388 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 CDHR5Q9HBB8 845 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 PCDH12Q9NPG4 1184 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 V9GYQ6 96 aa17.17■□□□□ 0.34
SCUBE2-202ENST00000450649 DNAH12Q6ZR08 3092 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 A0A087X1B8 175 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 DYTNA2CJ06 578 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 NDUFB5O43674 189 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 TSPAN1O60635 241 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 TXNP10599 105 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 MATKP42679 507 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 POLD2P49005 469 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 BCAT1P54687 386 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 MAPRE1Q15691 268 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 PYCR3Q53H96 274 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 LEMD2Q8NC56 503 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 OR6B3Q8NGW1 331 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 FAM149B1Q96BN6 582 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 C19orf60Q96EN9 201 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SEPHS2Q99611 448 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 AKTIPQ9H8T0 292 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 GIMAP2Q9UG22 337 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 PPEF2O14830 753 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 HCRTO43612 131 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 IL7RP16871 459 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 HNRNPFP52597 415 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SLC12A2P55011 1212 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SKIV2LQ15477 1246 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SLC25A52Q3SY17 297 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 BTBD8Q5XKL5 378 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SLCO6A1Q86UG4 719 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 PAPD5Q8NDF8 572 aaKnown RBP17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 SLC22A17Q8WUG5 538 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 CCDC126Q96EE4 140 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 OTUD5Q96G74 571 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 DPEP3Q9H4B8 488 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 KLQ9UEF7 1012 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 ATP11BQ9Y2G3 1177 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 PCDHA9Q9Y5H5 950 aa17.16■□□□□ 0.34
SCUBE2-202ENST00000450649 VTNP04004 478 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 MYL3P08590 195 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 ERCC2P18074 760 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 ACADSBP45954 432 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 GSK3BP49841 420 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 CYP2U1Q7Z449 544 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 CNTN4Q8IWV2 1026 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 S100ZQ8WXG8 99 aa17.15■□□□□ 0.34
SCUBE2-202ENST00000450649 CAMKK2Q96RR4 588 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms