RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 PTPRRQ15256 657 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 RASA2Q15283 850 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CNGA3Q16281 694 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 POM121L1PQ3SYA9 428 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SLC44A4Q53GD3 710 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TTMPQ5BVD1 217 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 LRRC73Q5JTD7 316 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 AGBL2Q5U5Z8 902 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CNTN4Q8IWV2 1026 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HCAR2Q8TDS4 363 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 DCAKDQ8WVC6 231 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FAM3CQ92520 227 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ARRDC3Q96B67 414 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PGM2Q96G03 612 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ATP6V1G3Q96LB4 118 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 GPR63Q9BZJ6 419 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ARHGEF3Q9NR81 526 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 NSMCE4AQ9NXX6 385 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZNF180Q9UJW8 692 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SARDHQ9UL12 918 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PPM1HQ9ULR3 514 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 IKBKGQ9Y6K9 419 aa12.72□□□□□ -0.37
HLA-DRB9-201ENST00000449413 C16orf96A6NNT2 1141 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CCL22O00626 93 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 MAN2B1O00754 1011 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 STX7O15400 261 aaKnown RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SLC7A4O43246 635 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 UGT1A9O60656 530 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 RNF40O75150 1001 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 KLF8O95600 359 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 IL1BP01584 269 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CYP2A6P11509 494 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HOXB2P14652 356 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 LHCGRP22888 699 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PSMA3P25788 255 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 VIPR1P32241 457 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HMGCLP35914 325 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 MMP12P39900 470 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 METAP1P53582 386 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TMPRSS15P98073 1019 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CCINQ13939 588 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PTPRCAPQ14761 206 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 UGP2Q16851 508 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FBXO43Q4G163 708 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 C2orf27AQ580R0 203 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 HSP90AA5PQ58FG0 334 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 LRRC66Q68CR7 880 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZNF470Q6ECI4 717 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PACS1Q6VY07 963 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 DPPA4Q7L190 304 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SLC26A11Q86WA9 606 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 OR4K2Q8NGD2 314 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ARL8AQ96BM9 186 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 SCRN2Q96FV2 425 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FAM129BQ96TA1 746 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CPNE1Q99829 537 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 STMN4Q9H169 189 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 RSPH9Q9H1X1 276 aaPredicted RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 UGT1A7Q9HAW7 530 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 UGT1A10Q9HAW8 530 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 UGT1A8Q9HAW9 530 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 ZFYVE1Q9HBF4 777 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 FAM53CQ9NYF3 392 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 WNT16Q9UBV4 365 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 TBK1Q9UHD2 729 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 CA14Q9ULX7 337 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
HLA-DRB9-201ENST00000449413 A0A0U1RQS6 177 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 HMGB1P1B2RPK0 211 aaPredicted RBP12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 STK25O00506 426 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 ADAM23O75077 832 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 ADH1BP00325 375 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 C1SP09871 688 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 SP9P0CG40 484 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 ZNF30P17039 623 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 ATP5DP30049 168 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 GP5P40197 560 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 HADHAP40939 763 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 SLC1A2P43004 574 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 SERPINB9P50453 376 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 NEK3P51956 506 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 PRKCQQ04759 706 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 RALGDSQ12967 914 aa12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 THOC5Q13769 683 aaKnown RBP12.7□□□□□ -0.38
HLA-DRB9-201ENST00000449413 CDKN3Q16667 212 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms