RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 A0A0U1RQS6 177 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 FAM170BA6NMN3 283 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 BUD23O43709 281 aaKnown RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 RPS9P46781 194 aaKnown RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 DGKEP52429 567 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 DCDC1P59894 354 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 ZXDAP98168 799 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 XIAPP98170 497 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CREB5Q02930 508 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 ARHGEF7Q14155 803 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PTPRCAPQ14761 206 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 UBXN2BQ14CS0 331 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 TMEM52BQ4KMG9 183 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 LRRC73Q5JTD7 316 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 NEPROQ6NW34 567 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 AFTPHQ6ULP2 937 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 KIAA0408Q6ZU52 694 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 USP30Q70CQ3 517 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PJA1Q8NG27 643 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 EPS8L3Q8TE67 593 aaKnown RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 PBXIP1Q96AQ6 731 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PGM2Q96G03 612 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 MRGPRX1Q96LB2 322 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 MCMBPQ9BTE3 642 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 FOXQ1Q9C009 403 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 TBC1D17Q9HA65 648 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 IL1RAPL1Q9NZN1 696 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 PSMC3IPQ9P2W1 217 aaPredicted RBP19.25■□□□□ 0.67
RPS28-202ENST00000449223 FADS3Q9Y5Q0 445 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 LRRK1Q38SD2 2015 aa19.25■□□□□ 0.67
RPS28-202ENST00000449223 CCDC162PA2VCL2 907 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 DNTTP04053 509 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 C1SP09871 688 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 BPIP17213 487 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 SPINT3P49223 89 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 PEX6Q13608 980 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 GAS6Q14393 721 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 KRT71Q3SY84 523 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 LIPIQ6XZB0 460 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 RASSF3Q86WH2 238 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 OR4L1Q8NH43 312 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 DCAKDQ8WVC6 231 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 CPNE1Q99829 537 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 RAD18Q9NS91 495 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 APPL1Q9UKG1 709 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 FZD4Q9ULV1 537 aa19.24■□□□□ 0.67
RPS28-202ENST00000449223 GAPDHSO14556 408 aaPredicted RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 GOT2P00505 430 aaKnown RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 MYZAPP0CAP1 466 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 TAS2R38P59533 333 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 SFSWAPQ12872 951 aaKnown RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 THOC5Q13769 683 aaKnown RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 TTC31Q49AM3 519 aaPredicted RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 TNFAIP8L3Q5GJ75 292 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 CYP2U1Q7Z449 544 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 KBTBD6Q86V97 674 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 CILP2Q8IUL8 1156 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 CTAGE3PQ8IX95 158 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 PPM1NQ8N819 430 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 C2CD4AQ8NCU7 369 aaPredicted RBP19.23■□□□□ 0.67
RPS28-202ENST00000449223 SIPA1Q96FS4 1042 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 CHRDQ9H2X0 955 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 PKD2L2Q9NZM6 624 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 SERGEFQ9UGK8 458 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 FKBPLQ9UIM3 349 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 NCOR1O75376 2440 aa19.23■□□□□ 0.67
RPS28-202ENST00000449223 AGAP14A8MT82 685 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 POC1B-GALNT4F8VUJ3 575 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 CCL22O00626 93 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 TSPAN6O43657 245 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 OPA1O60313 960 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 PIAS1O75925 651 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 SLC4A1P02730 911 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 INHBAP08476 426 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 ELFN1P0C7U0 828 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 NDUFV2P19404 249 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 OGNP20774 298 aaKnown RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 FOXN2P32314 431 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 SPAM1P38567 509 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 MSH2P43246 934 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 CSE1LP55060 971 aaKnown RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 TMPRSS15P98073 1019 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 ILF2Q12905 390 aaKnown RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 TJAP1Q5JTD0 557 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 TECPR1Q7Z6L1 1165 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 HDDC3Q8N4P3 179 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 OR6P1Q8NGX9 317 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 AGAP2Q99490 1192 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 SUDS3Q9H7L9 328 aaPredicted RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 TMBIM4Q9HC24 238 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 BPIFA1Q9NP55 256 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 POLMQ9NP87 494 aaPredicted RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 IL26Q9NPH9 171 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 MED4Q9NPJ6 270 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 IARS2Q9NSE4 1012 aaKnown RBP19.22■□□□□ 0.67
RPS28-202ENST00000449223 FBXL12Q9NXK8 326 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 ITM2BQ9Y287 266 aa19.22■□□□□ 0.67
RPS28-202ENST00000449223 A0A1W2PP55 124 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms