RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 DHRS4L2Q6PKH6 230 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 CHST15Q7LFX5 561 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 GPR180Q86V85 440 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 NLRC5Q86WI3 1866 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 RYBPQ8N488 228 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 TWIST2Q8WVJ9 160 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 SNRNP27Q8WVK2 155 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 CCDC126Q96EE4 140 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 IMP4Q96G21 291 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 ARNT2Q9HBZ2 717 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 MRPL40Q9NQ50 206 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 FLRT1Q9NZU1 646 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 SLC8A2Q9UPR5 921 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 ARPC2O15144 300 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 MYF6P23409 242 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 SERPINH1P50454 418 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 CCT8P50990 548 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 HERVK_113P63132 956 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 ATP6AP1Q15904 470 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 AGMOQ6ZNB7 445 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 TMEM86AQ8N2M4 240 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 PGBD5Q8N414 524 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 RTL3Q8N8U3 475 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 OR6P1Q8NGX9 317 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 HMCESQ96FZ2 354 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 ERVK-6Q9BXR3 956 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 CIDEBQ9UHD4 219 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 TDRKHQ9Y2W6 561 aaKnown RBP13.66□□□□□ -0.22
POLR1B-209ENST00000448770 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
POLR1B-209ENST00000448770 MROH6A6NGR9 719 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 CNTN5O94779 1100 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ITGB1P05556 798 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 LINC00032P0C843 101 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 YAP1P46937 504 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ATP6V0D1P61421 351 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 MERTKQ12866 999 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 PMS2P3Q13401 168 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 SLC36A3Q495N2 470 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 KCTD21Q4G0X4 260 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 INTS11Q5TA45 600 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 SLC22A9Q8IVM8 553 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ZUFSPQ96AP4 578 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 VPS33AQ96AX1 596 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TBATAQ96M53 351 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 NPLQ9BXD5 320 aaPredicted RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 SLC25A51Q9H1U9 297 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 MID1IP1Q9NPA3 183 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 THEGQ9P2T0 379 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 POLG2Q9UHN1 485 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 GMEB1Q9Y692 573 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ZFC3H1O60293 1989 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 PTPRDP23468 1912 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ARL5CA6NH57 179 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 EI24O14681 340 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 LDB2O43679 373 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 KPNA6O60684 536 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 THP07101 528 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ATXN1LP0C7T5 689 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 PRDX3P30048 256 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 SLC5A3P53794 718 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 UPP1Q16831 310 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 ALFQ53S48 1182 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 SIRPB2Q5JXA9 342 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 IRAK1BP1Q5VVH5 260 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 LCN8Q6JVE9 175 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 FNDC8Q8TC99 324 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 MYRFLQ96LU7 910 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 BIRC8Q96P09 236 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
POLR1B-209ENST00000448770 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 FAM105AQ9NUU6 356 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 PCDHA9Q9Y5H5 950 aa13.65□□□□□ -0.22
POLR1B-209ENST00000448770 TCRBV5S2A0A599 114 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 PIRTP0C851 137 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 HSD17B1P14061 328 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 FDXRP22570 491 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 CCR1P32246 355 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 NFKB2Q00653 900 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
POLR1B-209ENST00000448770 TBPL2Q6SJ96 375 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 ZBTB46Q86UZ6 589 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 CLYBLQ8N0X4 340 aa13.64□□□□□ -0.23
POLR1B-209ENST00000448770 TRPC4APQ8TEL6 797 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms