RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	LMNTD2	Q8IXW0	634 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	AFAP1L2	Q8N4X5	818 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CCDC33	Q8N5R6	958 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	NPW	Q8N729	165 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RTL3	Q8N8U3	475 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ATP6V0D2	Q8N8Y2	350 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	GOLM1	Q8NBJ4	401 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SYT8	Q8NBV8	401 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TRPV1	Q8NER1	839 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CALML6	Q8TD86	181 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	NSMCE1	Q8WV22	266 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CMTM5	Q96DZ9	223 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FCRL2	Q96LA5	508 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	C8orf48	Q96LL4	319 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	C1orf74	Q96LT6	269 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	KCNK16	Q96T55	309 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MYCBP	Q99417	103 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PKMYT1	Q99640	499 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	IL12RB2	Q99665	862 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	GPR22	Q99680	433 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ADAM2	Q99965	735 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RTP3	Q9BQQ7	232 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MLPH	Q9BV36	600 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MECR	Q9BV79	373 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FSD1L	Q9BXM9	530 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CADM1	Q9BY67	442 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MAGEB5	Q9BZ81	275 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RHOJ	Q9H4E5	214 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RETREG1	Q9H6L5	497 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	AGO3	Q9H9G7	860 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	NMRAL1	Q9HBL8	299 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	VPS45	Q9NRW7	570 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	IARS2	Q9NSE4	1012 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	OLA1	Q9NTK5	396 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	COMMD8	Q9NX08	183 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MIOS	Q9NXC5	875 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	COPG2	Q9UBF2	871 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	IPO11	Q9UI26	975 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ANGPTL2	Q9UKU9	493 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TCFL5	Q9UL49	500 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	EMCN	Q9ULC0	261 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SCML2	Q9UQR0	700 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	DNAJC16	Q9Y2G8	782 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	INPP5F	Q9Y2H2	1132 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PCDHB12	Q9Y5F1	795 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	HEATR9	A2RTY3	570 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995		A8MUI8	341 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	KCNU1	A8MYU2	1149 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	RGS13	O14921	159 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	SYN3	O14994	580 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	MGEA5	O60502	916 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	DIAPH2	O60879	1101 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	FKTN	O75072	461 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	FKBP6	O75344	327 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TM7SF2	O76062	418 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	DDHD2	O94830	711 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	OAZ2	O95190	189 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	RTN3	O95197	1032 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	PAPSS2	O95340	614 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	PSMG1	O95456	288 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	C2	P06681	752 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ENO1	P06733	434 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ADRB1	P08588	477 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TPBGL	P0DKB5	382 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	KIT	P10721	976 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	STMN1	P16949	149 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	HOXD10	P28358	340 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ADSL	P30566	484 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	VHL	P40337	213 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	BRCC3	P46736	316 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TM4SF4	P48230	202 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	CD151	P48509	253 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	FLT3LG	P49771	235 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TSC2	P49815	1807 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	TUB	P50607	506 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	PAPOLA	P51003	745 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	CLCN5	P51795	746 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	KPNA1	P52294	538 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	COL4A4	P53420	1690 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	COPA	P53621	1224 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	SLC5A3	P53794	718 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	CACNA2D1	P54289	1103 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ALDH18A1	P54886	795 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	AP2B1	P63010	937 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	POU4F1	Q01851	419 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	SLC34A1	Q06495	639 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ELAVL2	Q12926	359 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ZBTB17	Q13105	803 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	PRKAA1	Q13131	559 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	EIF4EBP2	Q13542	120 aa	Predicted RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ITGA7	Q13683	1181 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	ITGA9	Q13797	1035 aa		4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	HNRNPD	Q14103	355 aa	Known RBP	4.08	□□□□□ -1.76
PTPN12-208	ENST00000447995	USP10	Q14694	798 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms