RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TM4SF20Q53R12 229 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 HECTD3Q5T447 861 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 C9orf57Q5W0N0 161 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 RINT1Q6NUQ1 792 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TMTC3Q6ZXV5 915 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 APBB1IPQ7Z5R6 666 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 KIAA0907Q7Z7F0 614 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 CCDC83Q8IWF9 413 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ACRBPQ8NEB7 543 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 FDCSPQ8NFU4 85 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ETNPPLQ8TBG4 499 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 KISS1RQ969F8 398 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 C19orf24Q9BVV8 132 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TTLL2Q9BWV7 592 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ENKD1Q9H0I2 346 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 ZSWIM4Q9H7M6 989 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 BARHL2Q9NY43 387 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 AKAP7Q9P0M2 348 aaPredicted RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 SUN2Q9UH99 717 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 FZD4Q9ULV1 537 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 UBQLN1Q9UMX0 589 aaKnown RBP5.07□□□□□ -1.6
SDCBP-205ENST00000447267 SCML1Q9UN30 329 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 HIVEP2P31629 2446 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 SCN8AQ9UQD0 1980 aa5.07□□□□□ -1.6
SDCBP-205ENST00000447267 TDRD6O60522 2096 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 TRGV8A0A0C4DH27 118 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 H7C1Q1 480 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MATN2O00339 956 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 PIRO00625 290 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF185O15231 689 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 RNASEH1O60930 286 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 FBXO21O94952 628 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 PENKP01210 267 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 IFNA2P01563 188 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MCF2P10911 925 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 EGR1P18146 543 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MX1P20591 662 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 CYP3A5P20815 502 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 DNASE1P24855 282 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 CHMLP26374 656 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MC4RP32245 332 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SPAM1P38567 509 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 PBX1P40424 430 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SELENOPP49908 381 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 VAMP7P51809 220 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ADORA2A-AS1P86434 159 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 EIF2B5Q13144 721 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 PPP2R5CQ13362 524 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 TOP3AQ13472 1001 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 EIF4HQ15056 248 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 EPHA7Q15375 998 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 Q4G0T1 1027 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SETMARQ53H47 684 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 DCAF12Q5T6F0 453 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 NCAPH2Q6IBW4 605 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 GCNT7Q6ZNI0 430 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ARHGAP36Q6ZRI8 547 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 CHST9Q7L1S5 443 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 PTAR1Q7Z6K3 402 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 OSTM1Q86WC4 334 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SFTPA2Q8IWL1 248 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 LEO1Q8WVC0 666 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF669Q96BR6 464 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 RTP4Q96DX8 246 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SPATA17Q96L03 361 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 BMFQ96LC9 184 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 LRRC37BQ96QE4 947 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 NUDT22Q9BRQ3 303 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MENTQ9BUN1 341 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 DDA1Q9BW61 102 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 NACA2Q9H009 215 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ILKAPQ9H0C8 392 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ING2Q9H160 280 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 SMURF1Q9HCE7 757 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 AGPAT4Q9NRZ5 378 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 DDX43Q9NXZ2 648 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 IPO11Q9UI26 975 aaKnown RBP5.06□□□□□ -1.6
SDCBP-205ENST00000447267 B3GNT3Q9Y2A9 372 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 MYO7BQ6PIF6 2116 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 ZGRF1Q86YA3 2104 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 CITO14578 2027 aa5.06□□□□□ -1.6
SDCBP-205ENST00000447267 IGHV5-10-1A0A0J9YXX1 117 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 SPTY2D1-AS1A0A0U1RR47 76 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 TTC26A0AVF1 554 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 FRMD3A2A2Y4 597 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 POM121BA6NF01 834 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 F8VP50 259 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 K7ERI5 159 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 MDM4O15151 490 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PDPK1O15530 556 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 B4GAT1O43505 415 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 CREG1O75629 220 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 STK17BO94768 372 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 MPIG6BO95866 241 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PYGMP11217 842 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 TSHRP16473 764 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 DRD3P35462 400 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ACVRL1P37023 503 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PPP3CCP48454 512 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms