RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 TNNC2P02585 160 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 FAM200BP0CF97 657 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 EPXP11678 715 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 CCNB1P14635 433 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 AP2B1P63010 937 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 EXOSC10Q01780 885 aaKnown RBP6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 FIGLAQ6QHK4 219 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 PAQR9Q6ZVX9 377 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 ZNF354CQ86Y25 554 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 HCAR2Q8TDS4 363 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 FAM216AQ8WUB2 273 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 LHPPQ9H008 270 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 EPHA6Q9UF33 1036 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 SLCO3A1Q9UIG8 710 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 RARRES3Q9UL19 164 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 PPT2Q9UMR5 302 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 RNF6Q9Y252 685 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 EPPK1P58107 5090 aaKnown RBP6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 B4DGG1 531 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 TM7SF2O76062 418 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 TEAD1P28347 426 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 LIMS1P48059 325 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 PTH2RP49190 550 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 DLX5P56178 289 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 NTRK3Q16288 839 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 FAM133BQ5BKY9 247 aaKnown RBP6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 DEF8Q6ZN54 512 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 DOLPP1Q86YN1 238 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 DSELQ8IZU8 1212 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 SH2D3CQ8N5H7 860 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 UBXN4Q92575 508 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 APOOQ9BUR5 198 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 OSBPL1AQ9BXW6 950 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 BHMT2Q9H2M3 363 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 IL36AQ9UHA7 158 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 LNPEPQ9UIQ6 1025 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 SIX4Q9UIU6 781 aa6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
BRAFP1-201ENST00000445336 GTF3C1Q12789 2109 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 PIKFYVEQ9Y2I7 2098 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 LRIG2O94898 1065 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TMEM191BP0C7N4 346 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 ILF3Q12906 894 aaKnown RBP eCLIP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TMEM130Q8N3G9 435 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 ZBED6CLQ96FA7 236 aaPredicted RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TRIM7Q9C029 511 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TP63Q9H3D4 680 aaPredicted RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TMEM51Q9NW97 253 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CPAMD8Q8IZJ3 1885 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 A8MXQ7 604 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CACNB4O00305 520 aaPredicted RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 HBQ1P09105 142 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CA5AP35218 305 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 ETV3P41162 512 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TNNC1P63316 161 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 GTF2BQ00403 316 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 DNM1Q05193 864 aaKnown RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 SLC20A2Q08357 652 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TMEM52BQ4KMG9 183 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TTC22Q5TAA0 569 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 TIGD7Q6NT04 549 aaPredicted RBP6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 ADGRE4PQ86SQ3 457 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 OR56A4Q8NGH8 313 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 FAM57AQ8TBR7 257 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 WFDC5Q8TCV5 224 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 DPEP2Q9H4A9 486 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CEP83Q9Y592 693 aa6.31□□□□□ -1.4
BRAFP1-201ENST00000445336 CUBNO60494 3623 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 SONP18583 2426 aaKnown RBP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 KLF18A0A0U1RQI7 1052 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 GRID2IPA4D2P6 1211 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 ASPDHA6ND91 283 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 KPNA3O00505 521 aaPredicted RBP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 PDGFRBP09619 1106 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 TNFSF10P50591 281 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 TFAMQ00059 246 aaKnown RBP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 ADCY2Q08462 1091 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 KAZNQ674X7 775 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 ENPP7Q6UWV6 458 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 FUKQ8N0W3 1084 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 ENDOVQ8N8Q3 282 aaKnown RBP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 KCNK16Q96T55 309 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 TAF6LQ9Y6J9 622 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 TACC2O95359 2948 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 CR1P17927 2039 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 A0A087X1B8 175 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 PIN1P1O15428 100 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 PALMO75781 387 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 CAPN1P07384 714 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 APBA1Q02410 837 aa6.3□□□□□ -1.4
BRAFP1-201ENST00000445336 DLG2Q15700 870 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms