RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SLC28A1O00337 649 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 KCNE1P15382 129 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 XRCC1P18887 633 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 PBX3P40426 434 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 MAPK8P45983 427 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 RPL38P63173 70 aaKnown RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 RTP4Q96DX8 246 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 DGCR6LQ9BY27 220 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 OSBPL6Q9BZF3 934 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 PIDD1Q9HB75 910 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 TMCC3Q9ULS5 477 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 UMPSP11172 480 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 HOXB6P17509 224 aaKnown RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 RRM2P31350 389 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 SOX6P35712 828 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ST13P50502 369 aaKnown RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 MAPK10P53779 464 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 FKBP1BP68106 108 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ITIH5Q86UX2 942 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ASB9Q96DX5 294 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 CENPNQ96H22 339 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 PRDM5Q9NQX1 630 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 IRAK2O43187 625 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 RFX4Q33E94 735 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 TRIM60Q495X7 471 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 GPR107Q5VW38 600 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ZNF467Q7Z7K2 595 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 LDB1Q86U70 411 aaPredicted RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 AHI1Q8N157 1196 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 EXOC2Q96KP1 924 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ADPRHL2Q9NX46 363 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 AMHP03971 560 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ALDOAP04075 364 aaKnown RBP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 MC4RP32245 332 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ZNF33AQ06730 810 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 GALNT2Q10471 571 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 ADCK2Q7Z695 626 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.63■□□□□ 0.25
TCOF1-206ENST00000445265 SPPL2AQ8TCT8 520 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 CAMKK2Q96RR4 588 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 SNX6Q9UNH7 406 aa16.63■□□□□ 0.25
TCOF1-206ENST00000445265 DLX3O60479 287 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CCNA2P20248 432 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 SERPINA4P29622 427 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CLCQ05315 142 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 BOP1Q14137 746 aaKnown RBP16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CMPK2Q5EBM0 449 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CNSTQ6PJW8 725 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ANKS3Q6ZW76 656 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ADGRG6Q86SQ4 1221 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 PDSS2Q86YH6 399 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CBR4Q8N4T8 237 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 OR4K2Q8NGD2 314 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 DYRK1BQ9Y463 629 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
TCOF1-206ENST00000445265 MATN2O00339 956 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 DLGAP3O95886 979 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 DHRS4L1P0CG22 281 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 SLC7A1P30825 629 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 KRT20P35900 424 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CHI3L1P36222 383 aaPredicted RBP16.62■□□□□ 0.25
TCOF1-206ENST00000445265 SPPL2BQ8TCT7 592 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 BPIFA1Q9NP55 256 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 GABRDO14764 452 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 EPN2O95208 641 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CST1P01037 141 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CGB2Q6NT52 195 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ZNF483Q8TF39 744 aaPredicted RBP16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ARL5CA6NH57 179 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 SERPIND1P05546 499 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 GNAZP19086 355 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 POLR2JP52435 117 aaKnown RBP16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ACSM2AQ08AH3 577 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 CNTN1Q12860 1018 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ACSM2BQ68CK6 577 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 GCNT7Q6ZNI0 430 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 ZNF621Q6ZSS3 439 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 HFE2Q6ZVN8 426 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 REEP1Q9H902 201 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 TXNRD2Q9NNW7 524 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 TSC22D4Q9Y3Q8 395 aa16.62■□□□□ 0.25
TCOF1-206ENST00000445265 FFAR3O14843 346 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 GPR42O15529 346 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ZBTB14O43829 449 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 AHSGP02765 367 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PROZP22891 400 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PPM1LQ5SGD2 360 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 PAOXQ6QHF9 649 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 SYT12Q8IV01 421 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 RAD21L1Q9H4I0 556 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 COQ10BQ9H8M1 238 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ZFP14Q9HCL3 533 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 SMPD3Q9NY59 655 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 SH3BP4Q9P0V3 963 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 GMIPQ9P107 970 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ENOPH1Q9UHY7 261 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 MFHAS1Q9Y4C4 1052 aa16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ARIH1Q9Y4X5 557 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.61■□□□□ 0.25
TCOF1-206ENST00000445265 ADCY6O43306 1168 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms