RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 BUD23O43709 281 aaKnown RBP17.23■□□□□ 0.35
LIME1-202ENST00000444951 MMP20O60882 483 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 NDUFS2O75306 463 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 C1QTNF9P0C862 333 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 MGAT1P26572 445 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CD6P30203 668 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 OXTRP30559 389 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 VIPR1P32241 457 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 MMP12P39900 470 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CRADDP78560 199 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 ELP6Q0PNE2 266 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 ARHGEF7Q14155 803 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 HLTFQ14527 1009 aaKnown RBP eCLIP17.23■□□□□ 0.35
LIME1-202ENST00000444951 CCDC38Q502W7 563 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 LRRC8BQ6P9F7 803 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CRTC1Q6UUV9 634 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 SLC36A4Q6YBV0 504 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 ZNF534Q76KX8 674 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 DPPA4Q7L190 304 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 LYSMD3Q7Z3D4 306 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 HOOK3Q86VS8 718 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 MCUQ8NE86 351 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CXorf40AQ8TE69 158 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 KLK6Q92876 244 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 RAB7BQ96AH8 199 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 GPR174Q9BXC1 333 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 GPR63Q9BZJ6 419 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 CAPN10Q9HC96 672 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 FAM114A2Q9NRY5 505 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 ZNF711Q9Y462 761 aa17.23■□□□□ 0.35
LIME1-202ENST00000444951 LRRC72A6NJI9 287 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 NDC80O14777 642 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 AURKAO14965 403 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 AREL1O15033 823 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 SLC7A4O43246 635 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 RNGTTO60942 597 aaKnown RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 BANF1O75531 89 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 CLDN7O95471 211 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 SEMA4FO95754 770 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 CEACAM1P13688 526 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 LHCGRP22888 699 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 MAT2AP31153 395 aaKnown RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 LIG3P49916 1009 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 SUOXP51687 545 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 HP1BP3Q5SSJ5 553 aaPredicted RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 LRRC66Q68CR7 880 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 GLT6D1Q7Z4J2 308 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 PIP4P1Q86T03 277 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 CAND1Q86VP6 1230 aaKnown RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 SPOCK2Q92563 424 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 UBXN4Q92575 508 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 HSPA12BQ96MM6 686 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 MCCC1Q96RQ3 725 aaPredicted RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 TMEM121BQ9BXQ6 578 aaPredicted RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 SGK2Q9HBY8 427 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 ARNT2Q9HBZ2 717 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
LIME1-202ENST00000444951 BFARQ9NZS9 450 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 COQ6Q9Y2Z9 468 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 PPIL1Q9Y3C6 166 aa17.22■□□□□ 0.35
LIME1-202ENST00000444951 A0A1W2PQU0 124 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 TSPAN6O43657 245 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 ELFN1P0C7U0 828 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 C7P10643 843 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 CARSP49589 748 aaKnown RBP17.21■□□□□ 0.35
LIME1-202ENST00000444951 RALGDSQ12967 914 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 ACOX1Q15067 660 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 CNGA3Q16281 694 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 DUOXA1Q1HG43 343 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 BBS9Q3SYG4 887 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 TMEM52BQ4KMG9 183 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 SEL1L3Q68CR1 1132 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 CASC4Q6P4E1 433 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 ZDHHC24Q6UX98 284 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 CCDC25Q86WR0 208 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 IFT20Q8IY31 132 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 OR2T34Q8NGX1 318 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 FBXO25Q8TCJ0 367 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 ART4Q93070 314 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 GTPBP2Q9BX10 602 aaKnown RBP17.21■□□□□ 0.35
LIME1-202ENST00000444951 C6orf106Q9H6K1 298 aaPredicted RBP17.21■□□□□ 0.35
LIME1-202ENST00000444951 MAGEE1Q9HCI5 957 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 SYBUQ9NX95 663 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 WSB2Q9NYS7 404 aaPredicted RBP17.21■□□□□ 0.35
LIME1-202ENST00000444951 SLC6A14Q9UN76 642 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 FNDC3AQ9Y2H6 1198 aaKnown RBP17.21■□□□□ 0.35
LIME1-202ENST00000444951 KCTD3Q9Y597 815 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 ARL5AQ9Y689 179 aa17.21■□□□□ 0.35
LIME1-202ENST00000444951 NUMA1Q14980 2115 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 IGLON5A6NGN9 336 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 TP73O15350 636 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 AP1G1O43747 822 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 LZTS3O60299 673 aaPredicted RBP17.2■□□□□ 0.34
LIME1-202ENST00000444951 FSBPO95073 299 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 IGLV3-19P01714 112 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 HOXD12P35452 270 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 NPY2RP49146 381 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms