RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 BNC1Q01954 994 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 GALNT3Q14435 633 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 ELOCQ15369 112 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 AADACL2Q6P093 401 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 DRICH1Q6PGQ1 229 aaPredicted RBP12.24□□□□□ -0.45
LTBR-204ENST00000444814 B4GALNT4Q76KP1 1039 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
LTBR-204ENST00000444814 FAM71DQ8N9W8 422 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 SPATA22Q8NHS9 363 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 TLR10Q9BXR5 811 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 LRRC40Q9H9A6 602 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 GPR27Q9NS67 375 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 TRMT1Q9NXH9 659 aaKnown RBP12.24□□□□□ -0.45
LTBR-204ENST00000444814 PAK5Q9P286 719 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 FTSJ1Q9UET6 329 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 DOLKQ9UPQ8 538 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 CA5BQ9Y2D0 317 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 PKP3Q9Y446 797 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 SLCO1B1Q9Y6L6 691 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 CSNK1G3Q9Y6M4 447 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 EP300Q09472 2414 aaPredicted RBP12.24□□□□□ -0.45
LTBR-204ENST00000444814 NUMA1Q14980 2115 aa12.24□□□□□ -0.45
LTBR-204ENST00000444814 SHROOM3Q8TF72 1996 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 LOC285095A0A1B0GVY8 99 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 DCDC2BA2VCK2 349 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 AP3B1O00203 1094 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 CES2O00748 559 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 TM4SF5O14894 197 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 KCNK5O95279 499 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 TRIM16O95361 564 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 PRLP01236 227 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 CSF2P04141 144 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 CD59P13987 128 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 JUNDP17535 347 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 ETV3P41162 512 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 DUSP3P51452 185 aaPredicted RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 PPM1JQ5JR12 505 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 DBX2Q6ZNG2 339 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 KDELC2Q7Z4H8 507 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 SPATS2Q86XZ4 545 aaKnown RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 REXO1L1PQ8IX06 675 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 OR2I1PQ8NGU4 316 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 TRIB3Q96RU7 358 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 KCNF1Q9H3M0 494 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 FAM83DQ9H4H8 585 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 USP29Q9HBJ7 922 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 UBP1Q9NZI7 540 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 APOBEC3BQ9UH17 382 aaKnown RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 DRG1Q9Y295 367 aaKnown RBP12.23□□□□□ -0.45
LTBR-204ENST00000444814 ZNF711Q9Y462 761 aa12.23□□□□□ -0.45
LTBR-204ENST00000444814 PGRMC1O00264 195 aaKnown RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 CLDN7O95471 211 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 CRTAMO95727 393 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 IFNB1P01574 187 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 LHCGRP22888 699 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 CD68P34810 354 aaPredicted RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 TRIM23P36406 574 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SPINT3P49223 89 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 RPIAP49247 311 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 DCDC1P59894 354 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 GNG11P61952 73 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SEMG2Q02383 582 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 FZD2Q14332 565 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TRIP6Q15654 476 aaKnown RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 SLC1A5Q15758 541 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 KDELC1Q6UW63 502 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 ENPP7Q6UWV6 458 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 Q6ZVL8 140 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 HSD11B1LQ7Z5J1 315 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PIP4P1Q86T03 277 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TSPAN33Q86UF1 283 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PHACTR4Q8IZ21 702 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SLC35F6Q8N357 371 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 OR56A4Q8NGH8 313 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 CCDC110Q8TBZ0 833 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SAP25Q8TEE9 199 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 GRK7Q8WTQ7 553 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 RTP4Q96DX8 246 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 NSMCE3Q96MG7 304 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 FAM118BQ9BPY3 351 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TMEM121Q9BTD3 319 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 ZSCAN5AQ9BUG6 496 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 IL21RQ9HBE5 538 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 MBNL1Q9NR56 388 aaKnown RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 TTC7AQ9ULT0 858 aaPredicted RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 PCDH15Q96QU1 1955 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TRPM6Q9BX84 2022 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 TNFSF14O43557 240 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PIAS2O75928 621 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 ANXA6P08133 673 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PSMB4P28070 264 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
LTBR-204ENST00000444814 PTSQ03393 145 aa12.22□□□□□ -0.45
LTBR-204ENST00000444814 PSAPL1Q6NUJ1 521 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms