RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 AGERQ15109 404 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 SKIDA1Q1XH10 827 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 MSS51Q4VC12 460 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 SETMARQ53H47 684 aaPredicted RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 SPDYCQ5MJ68 293 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 TSTD2Q5T7W7 516 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 ZDHHC20Q5W0Z9 365 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 Q6ZVL8 140 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 CEP68Q76N32 757 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 CYP2U1Q7Z449 544 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 CCNJLQ8IV13 435 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 MPP5Q8N3R9 675 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 OR4K2Q8NGD2 314 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 KLK6Q92876 244 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 PEX13Q92968 403 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 EID2BQ96D98 161 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 STAMBPL1Q96FJ0 436 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 EBNA1BP2Q99848 306 aaKnown RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 NAT9Q9BTE0 207 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 KIFC1Q9BW19 673 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 PHACTR1Q9C0D0 580 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 CDH19Q9H159 772 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 DUSP15Q9H1R2 295 aaPredicted RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 EPC1Q9H2F5 836 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 CHRAC1Q9NRG0 131 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 NLE1Q9NVX2 485 aaPredicted RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 NFU1Q9UMS0 254 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 SOX13Q9UN79 622 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 KCTD3Q9Y597 815 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 MAD1L1Q9Y6D9 718 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 SCN8AQ9UQD0 1980 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 FAM237BA0A1B0GVD1 139 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 GOLGA8CPA6NN73 597 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 E7ESA3 106 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 LILRB5O75023 590 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 PAK4O96013 591 aaPredicted RBP15.75■□□□□ 0.11
USP40-206ENST00000443711 IGHV4-34P06331 123 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 GM2AP17900 193 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 PSMA3P25788 255 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 TNFRSF8P28908 595 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 HADHAP40939 763 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 ETV3P41162 512 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 ZNF140P52738 457 aaPredicted RBP15.75■□□□□ 0.11
USP40-206ENST00000443711 PTPN5P54829 565 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 SRSF5Q13243 272 aaKnown RBP15.75■□□□□ 0.11
USP40-206ENST00000443711 FGL2Q14314 439 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 ZNF765Q7L2R6 523 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 CCDC25Q86WR0 208 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 TMEFF1Q8IYR6 380 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 AGGF1Q8N302 714 aaeCLIP15.75■□□□□ 0.11
USP40-206ENST00000443711 DEFB119Q8N690 84 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 GPR161Q8N6U8 529 aaKnown RBP15.75■□□□□ 0.11
USP40-206ENST00000443711 BIRC7Q96CA5 298 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 NUS1Q96E22 293 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 DTD2Q96FN9 168 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 FMO2Q99518 471 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 FAM83DQ9H4H8 585 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 BPIFA1Q9NP55 256 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 SAYSD1Q9NPB0 183 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 DMTF1Q9Y222 760 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 MUC3AQ02505 3323 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 FANCMQ8IYD8 2048 aa15.75■□□□□ 0.11
USP40-206ENST00000443711 PLXNA2O75051 1894 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 CCDC78A2IDD5 438 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 MEI4A8MW99 385 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 SLC31A1O15431 190 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 BANF1O75531 89 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 RHOBTB1O94844 696 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 BPIP17213 487 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 PGAM1P18669 254 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 MCM3P25205 808 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 ELK3P41970 407 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 DCDC1P59894 354 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 PTPRCAPQ14761 206 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 LRRC14Q15048 493 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 ELF2Q15723 593 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 CCNI2Q6ZMN8 369 aaPredicted RBP15.74■□□□□ 0.11
USP40-206ENST00000443711 RFLNAQ6ZTI6 216 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 NLRP8Q86W28 1048 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 GPR26Q8NDV2 337 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 OR13C4Q8NGS5 318 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP40-206ENST00000443711 SNX19Q92543 992 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 DNAJC1Q96KC8 554 aaKnown RBP15.74■□□□□ 0.11
USP40-206ENST00000443711 HSPA12BQ96MM6 686 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 LENG8Q96PV6 779 aaPredicted RBP15.74■□□□□ 0.11
USP40-206ENST00000443711 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 ABCG8Q9H221 673 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 NFKBIL1Q9UBC1 381 aaPredicted RBP15.74■□□□□ 0.11
USP40-206ENST00000443711 CHMP2BQ9UQN3 213 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 TEX264Q9Y6I9 313 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 GON4LQ3T8J9 2241 aa15.74■□□□□ 0.11
USP40-206ENST00000443711 A0A1W2PPC4 97 aa15.73■□□□□ 0.11
USP40-206ENST00000443711 PRAMEF26H0Y7S4 382 aa15.73■□□□□ 0.11
USP40-206ENST00000443711 TTC4O95801 387 aa15.73■□□□□ 0.11
USP40-206ENST00000443711 POLBP06746 335 aa15.73■□□□□ 0.11
USP40-206ENST00000443711 TUBBP07437 444 aa15.73■□□□□ 0.11
USP40-206ENST00000443711 HNRNPA2B1P22626 353 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms